RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 KCNK6Q9Y257 313 aa15.08■□□□□ 0
SEC13-215ENST00000477547 LAMA1P25391 3075 aa15.08■□□□□ 0
SEC13-215ENST00000477547 ARID1BQ8NFD5 2236 aaPredicted RBP15.08■□□□□ 0
SEC13-215ENST00000477547 AQP9O43315 295 aa15.07■□□□□ 0
SEC13-215ENST00000477547 NIPSNAP2O75323 286 aa15.07■□□□□ 0
SEC13-215ENST00000477547 ERLIN1O75477 346 aa15.07■□□□□ 0
SEC13-215ENST00000477547 HAUS5O94927 633 aa15.07■□□□□ 0
SEC13-215ENST00000477547 VCLP18206 1134 aa15.07■□□□□ 0
SEC13-215ENST00000477547 SPINK2P20155 84 aa15.07■□□□□ 0
SEC13-215ENST00000477547 FMO4P31512 558 aa15.07■□□□□ 0
SEC13-215ENST00000477547 GP5P40197 560 aa15.07■□□□□ 0
SEC13-215ENST00000477547 ADARP55265 1226 aaKnown RBP15.07■□□□□ 0
SEC13-215ENST00000477547 C1orf61Q13536 156 aa15.07■□□□□ 0
SEC13-215ENST00000477547 C11orf96Q7Z7L8 435 aa15.07■□□□□ 0
SEC13-215ENST00000477547 CCL4L1Q8NHW4 92 aa15.07■□□□□ 0
SEC13-215ENST00000477547 BIRC8Q96P09 236 aa15.07■□□□□ 0
SEC13-215ENST00000477547 NDNQ99608 321 aa15.07■□□□□ 0
SEC13-215ENST00000477547 CPNE1Q99829 537 aa15.07■□□□□ 0
SEC13-215ENST00000477547 GSDMCQ9BYG8 508 aa15.07■□□□□ 0
SEC13-215ENST00000477547 OSGEPL1Q9H4B0 414 aa15.07■□□□□ 0
SEC13-215ENST00000477547 DNAJC16Q9Y2G8 782 aa15.07■□□□□ 0
SEC13-215ENST00000477547 PLEKHM1Q9Y4G2 1056 aa15.07■□□□□ 0
SEC13-215ENST00000477547 COL5A1P20908 1838 aaPredicted RBP15.07■□□□□ 0
SEC13-215ENST00000477547 EXOC1LA0A1B0GW35 172 aa15.06■□□□□ 0
SEC13-215ENST00000477547 CCDC151A5D8V7 595 aa15.06■□□□□ 0
SEC13-215ENST00000477547 IQCF5A8MTL0 148 aa15.06■□□□□ 0
SEC13-215ENST00000477547 H3BMM5 538 aa15.06■□□□□ 0
SEC13-215ENST00000477547 POP7O75817 140 aaKnown RBP15.06■□□□□ 0
SEC13-215ENST00000477547 PKMP14618 531 aaKnown RBP15.06■□□□□ 0
SEC13-215ENST00000477547 ITGB6P18564 788 aa15.06■□□□□ 0
SEC13-215ENST00000477547 DGKAP23743 735 aa15.06■□□□□ 0
SEC13-215ENST00000477547 AK4P27144 223 aaPredicted RBP15.06■□□□□ 0
SEC13-215ENST00000477547 GABRB3P28472 473 aa15.06■□□□□ 0
SEC13-215ENST00000477547 ACTR1BP42025 376 aa15.06■□□□□ 0
SEC13-215ENST00000477547 CSE1LP55060 971 aaKnown RBP15.06■□□□□ 0
SEC13-215ENST00000477547 ACTR1AP61163 376 aa15.06■□□□□ 0
SEC13-215ENST00000477547 CTBSQ01459 385 aa15.06■□□□□ 0
SEC13-215ENST00000477547 BOP1Q14137 746 aaKnown RBP15.06■□□□□ 0
SEC13-215ENST00000477547 BRD3Q15059 726 aa15.06■□□□□ 0
SEC13-215ENST00000477547 ELOCQ15369 112 aa15.06■□□□□ 0
SEC13-215ENST00000477547 UAP1Q16222 522 aaPredicted RBP15.06■□□□□ 0
SEC13-215ENST00000477547 SYTL3Q4VX76 610 aa15.06■□□□□ 0
SEC13-215ENST00000477547 RBM20Q5T481 1227 aaKnown RBP15.06■□□□□ 0
SEC13-215ENST00000477547 SLC30A9Q6PML9 568 aa15.06■□□□□ 0
SEC13-215ENST00000477547 AMZ2Q86W34 360 aa15.06■□□□□ 0
SEC13-215ENST00000477547 ZC3HC1Q86WB0 502 aaKnown RBP15.06■□□□□ 0
SEC13-215ENST00000477547 GATAD2AQ86YP4 633 aa15.06■□□□□ 0
SEC13-215ENST00000477547 KRT222Q8N1A0 295 aa15.06■□□□□ 0
SEC13-215ENST00000477547 GPATCH11Q8N954 259 aa15.06■□□□□ 0
SEC13-215ENST00000477547 HM13Q8TCT9 377 aa15.06■□□□□ 0
SEC13-215ENST00000477547 MRRFQ96E11 262 aaKnown RBP15.06■□□□□ 0
SEC13-215ENST00000477547 VPS39Q96JC1 886 aa15.06■□□□□ 0
SEC13-215ENST00000477547 LINC00615Q96LM1 132 aaPredicted RBP15.06■□□□□ 0
SEC13-215ENST00000477547 PANX3Q96QZ0 392 aa15.06■□□□□ 0
SEC13-215ENST00000477547 RBBP8Q99708 897 aa15.06■□□□□ 0
SEC13-215ENST00000477547 RHOJQ9H4E5 214 aa15.06■□□□□ 0
SEC13-215ENST00000477547 TMEM9BQ9NQ34 198 aa15.06■□□□□ 0
SEC13-215ENST00000477547 KLC4Q9NSK0 619 aa15.06■□□□□ 0
SEC13-215ENST00000477547 UCKL1Q9NWZ5 548 aa15.06■□□□□ 0
SEC13-215ENST00000477547 CORO1CQ9ULV4 474 aaPredicted RBP15.06■□□□□ 0
SEC13-215ENST00000477547 DOLKQ9UPQ8 538 aa15.06■□□□□ 0
SEC13-215ENST00000477547 COMMD10Q9Y6G5 202 aa15.06■□□□□ 0
SEC13-215ENST00000477547 GOLGA4Q13439 2230 aaKnown RBP15.06■□□□□ 0
SEC13-215ENST00000477547 KLHL33A6NCF5 533 aa15.05■□□□□ -0
SEC13-215ENST00000477547 E5RI56 91 aa15.05■□□□□ -0
SEC13-215ENST00000477547 GIPC1O14908 333 aa15.05■□□□□ -0
SEC13-215ENST00000477547 FFAR2O15552 330 aa15.05■□□□□ -0
SEC13-215ENST00000477547 TRIM16O95361 564 aa15.05■□□□□ -0
SEC13-215ENST00000477547 TOP3BO95985 862 aaKnown RBP15.05■□□□□ -0
SEC13-215ENST00000477547 AHSGP02765 367 aa15.05■□□□□ -0
SEC13-215ENST00000477547 GSTM1P09488 218 aa15.05■□□□□ -0
SEC13-215ENST00000477547 ZNF883P0CG24 379 aa15.05■□□□□ -0
SEC13-215ENST00000477547 IGF2RP11717 2491 aa15.05■□□□□ -0
SEC13-215ENST00000477547 HSD17B3P37058 310 aa15.05■□□□□ -0
SEC13-215ENST00000477547 GSTM4Q03013 218 aa15.05■□□□□ -0
SEC13-215ENST00000477547 BNIP3Q12983 259 aa15.05■□□□□ -0
SEC13-215ENST00000477547 NFE2L1Q14494 772 aa15.05■□□□□ -0
SEC13-215ENST00000477547 SLC29A2Q14542 456 aa15.05■□□□□ -0
SEC13-215ENST00000477547 TMED2Q15363 201 aa15.05■□□□□ -0
SEC13-215ENST00000477547 ZNF549Q6P9A3 640 aa15.05■□□□□ -0
SEC13-215ENST00000477547 TAF8Q7Z7C8 310 aa15.05■□□□□ -0
SEC13-215ENST00000477547 GKN2Q86XP6 184 aa15.05■□□□□ -0
SEC13-215ENST00000477547 KDF1Q8NAX2 398 aaPredicted RBP15.05■□□□□ -0
SEC13-215ENST00000477547 OR2L2Q8NH16 312 aa15.05■□□□□ -0
SEC13-215ENST00000477547 GPBAR1Q8TDU6 330 aa15.05■□□□□ -0
SEC13-215ENST00000477547 ELMO1Q92556 727 aa15.05■□□□□ -0
SEC13-215ENST00000477547 FAM136AQ96C01 138 aa15.05■□□□□ -0
SEC13-215ENST00000477547 PAFAH2Q99487 392 aa15.05■□□□□ -0
SEC13-215ENST00000477547 CCM2Q9BSQ5 444 aa15.05■□□□□ -0
SEC13-215ENST00000477547 AARSD1Q9BTE6 412 aaKnown RBP15.05■□□□□ -0
SEC13-215ENST00000477547 DNAAF2Q9NVR5 837 aaKnown RBP15.05■□□□□ -0
SEC13-215ENST00000477547 SLC23A2Q9UGH3 650 aa15.05■□□□□ -0
SEC13-215ENST00000477547 ST14Q9Y5Y6 855 aa15.05■□□□□ -0
SEC13-215ENST00000477547 FAM95CA0A1B0GW59 222 aa15.04■□□□□ -0
SEC13-215ENST00000477547 MGAT4DA6NG13 374 aa15.04■□□□□ -0
SEC13-215ENST00000477547 PDZK1P1A8MUH7 402 aa15.04■□□□□ -0
SEC13-215ENST00000477547 POC1B-GALNT4F8VUJ3 575 aa15.04■□□□□ -0
SEC13-215ENST00000477547 FAM155BO75949 473 aa15.04■□□□□ -0
SEC13-215ENST00000477547 ANXA6P08133 673 aa15.04■□□□□ -0
SEC13-215ENST00000477547 INHBAP08476 426 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms