RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 ACTRT2Q8TDY3 377 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 AFG1LQ8WV93 481 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 SHC3Q92529 594 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 EFHD2Q96C19 240 aaPredicted RBP3.45□□□□□ -1.86
SORT1-202ENST00000466471 EEF2KMTQ96G04 330 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 ZDHHC12Q96GR4 267 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 C20orf173Q96LM9 149 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 COG8Q96MW5 612 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 NECTIN4Q96NY8 510 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 BARD1Q99728 777 aaKnown RBP3.45□□□□□ -1.86
SORT1-202ENST00000466471 CCT7Q99832 543 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 HSD17B14Q9BPX1 270 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 REEP2Q9BRK0 252 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 TTPALQ9BTX7 342 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 FGFBP2Q9BYJ0 223 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 MRPS26Q9BYN8 205 aaKnown RBP3.45□□□□□ -1.86
SORT1-202ENST00000466471 KATNBL1Q9H079 304 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 KLC2Q9H0B6 622 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 PCDHAC1Q9H158 963 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 SLC6A17Q9H1V8 727 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 GOLPH3Q9H4A6 298 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 TRABDQ9H4I3 376 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 POMKQ9H5K3 350 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 FAM96AQ9H5X1 160 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 NRDE2Q9H7Z3 1164 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 USP29Q9HBJ7 922 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 KCNK9Q9NPC2 374 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 SLCO1B3Q9NPD5 702 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 PRMT8Q9NR22 394 aaPredicted RBP3.45□□□□□ -1.86
SORT1-202ENST00000466471 VPS45Q9NRW7 570 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 ARL8BQ9NVJ2 186 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 ANKMY1Q9P2S6 941 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 PSMC3IPQ9P2W1 217 aaPredicted RBP3.45□□□□□ -1.86
SORT1-202ENST00000466471 WNT16Q9UBV4 365 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 SLC7A8Q9UHI5 535 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 DNAJC12Q9UKB3 198 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 ITGA11Q9UKX5 1188 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 PAIP2BQ9ULR5 123 aaKnown RBP3.45□□□□□ -1.86
SORT1-202ENST00000466471 PCDHA12Q9UN75 941 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 SHOC2Q9UQ13 582 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 B3GNT3Q9Y2A9 372 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 DERAQ9Y315 318 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 FADS3Q9Y5Q0 445 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 HCFC2Q9Y5Z7 792 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 CEPT1Q9Y6K0 416 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 NAV1Q8NEY1 1877 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 NBASA2RRP1 2371 aa3.45□□□□□ -1.86
SORT1-202ENST00000466471 FBN1P35555 2871 aaKnown RBP3.45□□□□□ -1.86
SORT1-202ENST00000466471 MYH7BA7E2Y1 1941 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TTC3P53804 2025 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 F5P12259 2224 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 BSNQ9UPA5 3926 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 MUC22E2RYF6 1773 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 TCRBV7S2A1N4TA0A589 114 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CCDC78A2IDD5 438 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 PABPN1LA6NDY0 278 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 TMEM247A6NEH6 219 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 PRSS29PA6NIE9 313 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TSPY2A6NKD2 308 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SDR42E2A6NKP2 422 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 FOXO6A8MYZ6 492 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 B5MCH6 92 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 PCDH17O14917 1159 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SLC22A1O15245 554 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 LAMTOR5O43504 91 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ZC3H11AO75152 810 aaKnown RBP eCLIP3.44□□□□□ -1.86
SORT1-202ENST00000466471 GUCY1B2O75343 617 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ATP6V1G1O75348 118 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SERPINB7O75635 380 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TRMUO75648 421 aaKnown RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 TSPAN9O75954 239 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SLITRK3O94933 977 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 KLHL2O95198 593 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 EFEMP2O95967 443 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 KNG1P01042 644 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 VIPP01282 170 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ANXA6P08133 673 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 WEE2P0C1S8 567 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ACADMP11310 421 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 UNGP13051 313 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 TDGF1P13385 188 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CCDC130P13994 396 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ATF2P15336 505 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ZNF23P17027 643 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ZNF24P17028 368 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CDH2P19022 906 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 GLDCP23378 1020 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 TTKP33981 857 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 RPA3P35244 121 aaPredicted RBP3.44□□□□□ -1.86
SORT1-202ENST00000466471 PGM1P36871 562 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 MAGEA6P43360 314 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 SLCO1A2P46721 670 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 NPTX2P47972 431 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 NRIP1P48552 1158 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 POLD2P49005 469 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 CSRP3P50461 194 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 GPC3P51654 580 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 BCAT1P54687 386 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 NAPAP54920 295 aa3.44□□□□□ -1.86
SORT1-202ENST00000466471 ADARP55265 1226 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms