RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 ATG16L1Q676U5 607 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 KIAA1161Q6NSJ0 714 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 SBSNQ6UWP8 590 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 CCNYL1Q8N7R7 359 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 RHEBL1Q8TAI7 183 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 FOXJ1Q92949 421 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 ESAMQ96AP7 390 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 COX14Q96I36 57 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 NECAB3Q96P71 396 aaPredicted RBP16.55■□□□□ 0.24
NELFCD-201ENST00000460601 SORT1Q99523 831 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 BTBD1Q9H0C5 482 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 LATS2Q9NRM7 1088 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 NCKIPSDQ9NZQ3 722 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 CDYLQ9Y232 598 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 LAMA1P25391 3075 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 SUPT3HB4E1H0 165 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 SNX3O60493 162 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 MAGEC1O60732 1142 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 KERAO60938 352 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 LILRB5O75023 590 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 SUPT3HO75486 399 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 C7P10643 843 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 ATP5F1P24539 256 aaPredicted RBP16.55■□□□□ 0.24
NELFCD-201ENST00000460601 IGFALSP35858 605 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 PREPP48147 710 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 CLDN2P57739 230 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 ATP6V0D1P61421 351 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 LRRC32Q14392 662 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 CYHR1Q6ZMK1 362 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 PIGWQ7Z7B1 504 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 STAG3L4Q8TBR4 150 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 SKA2Q8WVK7 121 aaPredicted RBP16.55■□□□□ 0.24
NELFCD-201ENST00000460601 TRIM39Q9HCM9 518 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 PREBQ9HCU5 417 aa16.55■□□□□ 0.24
NELFCD-201ENST00000460601 USP36Q9P275 1121 aaKnown RBP16.55■□□□□ 0.24
NELFCD-201ENST00000460601 MRPS17Q9Y2R5 130 aaKnown RBP16.55■□□□□ 0.24
NELFCD-201ENST00000460601 CHURC1-FNTBB4DL54 471 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 DCNP07585 359 aaKnown RBP16.54■□□□□ 0.24
NELFCD-201ENST00000460601 TSPAN8P19075 237 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 DGKAP23743 735 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 AGERQ15109 404 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 PHKG1Q16816 387 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 ADAMTSL4Q6UY14 1074 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 NLRP8Q86W28 1048 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 TRIM42Q8IWZ5 723 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 TSTD1Q8NFU3 115 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 RFWD2Q8NHY2 731 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 SHDQ96IW2 340 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 SEC16BQ96JE7 1060 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 WDR26Q9H7D7 661 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 EBF2Q9HAK2 575 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 ITM2CQ9NQX7 267 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 TM7SF3Q9NS93 570 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 THAP1Q9NVV9 213 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 KCTD5Q9NXV2 234 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 MID2Q9UJV3 735 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 DCTN4Q9UJW0 460 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 ASB1Q9Y576 335 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 POM121BA6NF01 834 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 ATG13O75143 517 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 AP2A2O94973 939 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 AGTR2P50052 363 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 PRKAA2P54646 552 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 ABCE1P61221 599 aaKnown RBP16.54■□□□□ 0.24
NELFCD-201ENST00000460601 TGFBIQ15582 683 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 PPP1R3AQ16821 1122 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 C18orf21Q32NC0 220 aaPredicted RBP16.54■□□□□ 0.24
NELFCD-201ENST00000460601 GKAP1Q5VSY0 366 aaPredicted RBP16.54■□□□□ 0.24
NELFCD-201ENST00000460601 MBOAT1Q6ZNC8 495 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 MYO1HQ8N1T3 1032 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 SYNPOQ8N3V7 929 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 PTGR2Q8N8N7 351 aaPredicted RBP16.54■□□□□ 0.24
NELFCD-201ENST00000460601 RAB3IL1Q8TBN0 382 aa16.54■□□□□ 0.24
NELFCD-201ENST00000460601 PDLIM5Q96HC4 596 aaKnown RBP16.54■□□□□ 0.24
NELFCD-201ENST00000460601 NSRP1Q9H0G5 558 aaKnown RBP16.54■□□□□ 0.24
NELFCD-201ENST00000460601 SCAMP1O15126 338 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 GUCA1CO95843 209 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 FTH1P02794 183 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 FUCA1P04066 466 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 GFAPP14136 432 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 PDHA2P29803 388 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 TRIM23P36406 574 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 RGS4P49798 205 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 HNRNPH2P55795 449 aaKnown RBP16.53■□□□□ 0.24
NELFCD-201ENST00000460601 XKR5Q6UX68 686 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 SPATA21Q7Z572 469 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 PJA1Q8NG27 643 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 TOE1Q96GM8 510 aaKnown RBP16.53■□□□□ 0.24
NELFCD-201ENST00000460601 C7orf26Q96N11 449 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 TEX101Q9BY14 249 aa16.53■□□□□ 0.24
NELFCD-201ENST00000460601 C6orf106Q9H6K1 298 aaPredicted RBP16.53■□□□□ 0.24
NELFCD-201ENST00000460601 HGSO14964 777 aaPredicted RBP16.52■□□□□ 0.24
NELFCD-201ENST00000460601 GRK2P25098 689 aa16.52■□□□□ 0.24
NELFCD-201ENST00000460601 MTAPQ13126 283 aa16.52■□□□□ 0.24
NELFCD-201ENST00000460601 GBX1Q14549 363 aa16.52■□□□□ 0.24
NELFCD-201ENST00000460601 TTLL9Q3SXZ7 439 aa16.52■□□□□ 0.24
NELFCD-201ENST00000460601 ARL13AQ5H913 290 aaPredicted RBP16.52■□□□□ 0.24
NELFCD-201ENST00000460601 ZNF781Q8N8C0 355 aa16.52■□□□□ 0.24
NELFCD-201ENST00000460601 NSUN5Q96P11 429 aaKnown RBP16.52■□□□□ 0.24
NELFCD-201ENST00000460601 MRPL40Q9NQ50 206 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms