RNA–Protein interactions for RNA: ENST00000457953.6

KCNMA1-216, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-216ENST00000457953 TRIM71Q2Q1W2 868 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 FAM174BQ3ZCQ3 159 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 ZBED5Q49AG3 693 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 TRMOQ9BU70 441 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 AGO3Q9H9G7 860 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 EIF2B4Q9UI10 523 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 CNTN6Q9UQ52 1028 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 TRIM64CA6NLI5 447 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 TSPAN4O14817 238 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 NOS1APO75052 506 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 CDK4P11802 303 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 NKX2-5P52952 324 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 ZNF792Q3KQV3 632 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 OSTM1Q86WC4 334 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 VANGL1Q8TAA9 524 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 CD101Q93033 1021 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 GTPBP3Q969Y2 492 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 MLPHQ9BV36 600 aaPredicted RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 PCDHGC4Q9Y5F7 938 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 TNPO3Q9Y5L0 923 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 PABPC1P11940 636 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 AFF1P51825 1210 aaKnown RBP13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 HTRA3P83110 453 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 ABRQ12979 859 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 IKBKEQ14164 716 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 KLHL35Q6PF15 583 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 LINGO4Q6UY18 593 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 RAB2BQ8WUD1 216 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 PIH1D2Q8WWB5 315 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 CLN6Q9NWW5 311 aa13.35□□□□□ -0.27
KCNMA1-216ENST00000457953 A0A088AWK7 358 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 CASKO14936 926 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 EFCAB14O75071 495 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 GCATO75600 419 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 CLPXO76031 633 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 BEST1O76090 585 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 CD36P16671 472 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 PFKPQ01813 784 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 PPP1R3AQ16821 1122 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 STRADAQ7RTN6 431 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 SLC22A16Q86VW1 577 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 RAB43Q86YS6 212 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 TRIM48Q8IWZ4 208 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 C2orf73Q8N5S3 287 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 SMYD1Q8NB12 490 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 RPL10LQ96L21 214 aaKnown RBP13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 CEP295NLQ96MC4 621 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 MYCLP1P12525 358 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 MC4RP32245 332 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 HMGCS1Q01581 520 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 MEP1AQ16819 746 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 ARMC12Q5T9G4 340 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 ZNF697Q5TEC3 545 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 RETSATQ6NUM9 610 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 MZT2BQ6NZ67 158 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 NEK5Q6P3R8 708 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 PRSS55Q6UWB4 352 aaPredicted RBP13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 DEF8Q6ZN54 512 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 CLEC20AQ6ZU45 233 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 SLC35B4Q969S0 331 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 CXCL16Q9H2A7 254 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 IPPKQ9H8X2 491 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 MAGEE1Q9HCI5 957 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 MCUBQ9NWR8 336 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 DNAJB4Q9UDY4 337 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 SUV39H1O43463 412 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 RFPL1O75677 317 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 IVDP26440 423 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 TKTP29401 623 aaKnown RBP13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 CPNE9Q8IYJ1 553 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 RAB42Q8N4Z0 105 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 TOP6BLQ8N6T0 577 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 LRRC17Q8N6Y2 441 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 GRIN3AQ8TCU5 1115 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 SIPA1Q96FS4 1042 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 HERC2P3Q9BVR0 1158 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 SMURF2Q9HAU4 748 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 TMEM138Q9NPI0 162 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 VPS51Q9UID3 782 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 RPS6KA6Q9UK32 745 aa13.34□□□□□ -0.27
KCNMA1-216ENST00000457953 VILLO15195 856 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 ERAL1O75616 437 aaKnown RBP13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 OTCP00480 354 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 GPIP06744 558 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 CCND3P30281 292 aaPredicted RBP13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 SLC1A2P43004 574 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 GSTM5P46439 218 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 ITGA1P56199 1179 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 RHDQ02161 417 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 BCL2L1Q07817 233 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 TGFBIQ15582 683 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 PRR23CQ6ZRP0 262 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 TP53INP2Q8IXH6 220 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 POF1BQ8WVV4 589 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 AKTIPQ9H8T0 292 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 ZFYVE1Q9HBF4 777 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 SNTG1Q9NSN8 517 aa13.33□□□□□ -0.27
KCNMA1-216ENST00000457953 ZNF224Q9NZL3 707 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms