RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 SPRED1Q7Z699 444 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 SYVN1Q86TM6 617 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 TMEM209Q96SK2 561 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 CDH7Q9ULB5 785 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 SAMHD1Q9Y3Z3 626 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 SIPA1L1O43166 1804 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 A8MX80 341 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 H0YAE9 185 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 CXCR6O00574 342 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 TULP3O75386 442 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 MED26O95402 600 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 MLYCDO95822 493 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 UROSP10746 265 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 POU1F1P28069 291 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 TBX4P57082 545 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 ERVK-8P63133 956 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 ARHGEF7Q14155 803 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 CPSF6Q16630 551 aaKnown RBP eCLIP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 C6orf136Q5SQH8 315 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 DENND5AQ6IQ26 1287 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 UGT3A1Q6NUS8 523 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 ARMC8Q8IUR7 673 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 STARD8Q92502 1023 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 UHRF1Q96T88 793 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 IL12RB2Q99665 862 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 APOL4Q9BPW4 351 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 NFKBIZQ9BYH8 718 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 NOD1Q9Y239 953 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 IQCF5A8MTL0 148 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 EFCAB9A8MZ26 197 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 SLC1A7O00341 560 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 ACOX3O15254 700 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 RGS10O43665 173 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 ZNF24P17028 368 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 AZGP1P25311 298 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 HCAR3P49019 387 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 TUBA3CQ13748 450 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 CCDC85BQ15834 202 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 PYCR3Q53H96 274 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 SPANXN2Q5MJ10 180 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 CYP20A1Q6UW02 462 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 RANBP10Q6VN20 620 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 PAQR9Q6ZVX9 377 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 COLGALT2Q8IYK4 626 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 SVOPQ8N4V2 548 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 FAM86B1Q8N7N1 296 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 OR52B6Q8NGF0 335 aa13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 PRG3Q9Y2Y8 225 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-210ENST00000453744 SLC12A8A0AV02 714 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 FAM234BA2RU67 622 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 C2orf81A6NN90 581 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 USP2O75604 605 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 SMIM10L2AP0DMW4 78 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 SMIM10L2BP0DMW5 78 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 PIGAP37287 484 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 AQP6Q13520 282 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 DDR2Q16832 855 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 OVOS1Q6IE37 1185 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 GALNT10Q86SR1 603 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 SIX5Q8N196 739 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 HDAC2Q92769 488 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 REXO5Q96IC2 774 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 NSMCE3Q96MG7 304 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 DEPDC7Q96QD5 511 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 CHCHD6Q9BRQ6 235 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 TUBB1Q9H4B7 451 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 PDP1Q9P0J1 537 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 RBPJLQ9UBG7 517 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 CAB39Q9Y376 341 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 DLGAP1O14490 977 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 TREHO43280 583 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 GJB3O75712 270 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 HAPLN1P10915 354 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 GSTM2P28161 218 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 HSPA7P48741 367 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 HTR6P50406 440 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 ATP4BP51164 291 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 BEX3Q00994 111 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 SF3B4Q15427 424 aaKnown RBP eCLIP13.68□□□□□ -0.223e-70■■■■■ 60.5
UBE2D3-210ENST00000453744 STX19Q8N4C7 294 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 POLR1EQ9GZS1 481 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 DCSTAMPQ9H295 470 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 MUC13Q9H3R2 512 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 EHD3Q9NZN3 535 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 PTPRFP10586 1907 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 MICAL3Q7RTP6 2002 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 NTRK1P04629 796 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 ODC1P11926 461 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 AAK1Q2M2I8 961 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 UGT3A2Q3SY77 523 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 GTDC1Q4AE62 458 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 SLC22A17Q8WUG5 538 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 TSEN34Q9BSV6 310 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 NUAK2Q9H093 628 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 AP5M1Q9H0R1 490 aa13.68□□□□□ -0.22
UBE2D3-210ENST00000453744 AIREO43918 545 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 TBX18O95935 607 aa13.67□□□□□ -0.22
UBE2D3-210ENST00000453744 WARSP23381 471 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms