RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ZNF566Q969W8 418 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 COL21A1Q96P44 957 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 GFM1Q96RP9 751 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 CDC6Q99741 560 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 USB1Q9BQ65 265 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 NTN4Q9HB63 628 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 NT5MQ9NPB1 228 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MYEF2Q9P2K5 600 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 NR2E1Q9Y466 385 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 V9GYS6 101 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CRYBG1Q9Y4K1 1723 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RCCD1A6NED2 376 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 KLRF2D3W0D1 207 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 DFFAO00273 331 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 HOXC11O43248 304 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 SOAT2O75908 522 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 LRIG2O94898 1065 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 UPP2O95045 317 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ADRB1P08588 477 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ACSM4P0C7M7 580 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CCNYL3P0C7X3 344 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 NR2F6P10588 404 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SPI1P17947 270 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RAB3BP20337 219 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 EFNA1P20827 205 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 AKT1P31749 480 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RBM34P42696 430 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 CLCNKAP51800 687 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 DOC2AQ14183 400 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PRPSAP1Q14558 356 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MXD4Q14582 209 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 NTRK3Q16288 839 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MAPKAPK3Q16644 382 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 BMT2Q1RMZ1 405 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 LRRC26Q2I0M4 334 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SH3PXD2AQ5TCZ1 1133 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 FAM180BQ6P0A1 224 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 DENND5BQ6ZUT9 1274 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CHSY3Q70JA7 882 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 IRF2BP2Q7Z5L9 587 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SNX20Q7Z614 316 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 HGDQ93099 445 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MAGEB5Q9BZ81 275 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 TDRD3Q9H7E2 651 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 RBFOX1Q9NWB1 397 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 LRP2BPQ9P2M1 347 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RPS6KA6Q9UK32 745 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 UBQLN1Q9UMX0 589 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 SAMHD1Q9Y3Z3 626 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 PLCE1Q9P212 2302 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SCN2AQ99250 2005 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 H0YIV9 168 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 APOC4-APOC2K7ER74 178 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SLC28A1O00337 649 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 HSPA12AO43301 675 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PRAMEF1O95521 474 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 RAB3DO95716 219 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PAK4O96013 591 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 APOC2P02655 101 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SFNP31947 248 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 TGM4P49221 684 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 FMO5P49326 533 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PLA2G16P53816 162 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SPCS3P61009 180 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PPP3R1P63098 170 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 KCNJ10P78508 379 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ALDH6A1Q02252 535 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 LLGL1Q15334 1064 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 VMACQ2NL98 169 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZMAT1Q5H9K5 638 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MIIPQ5JXC2 388 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 GLRA4Q5JXX5 417 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 DNAJC24Q6P3W2 148 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZNF571Q7Z3V5 609 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZSWIM9Q86XI8 627 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 PLD6Q8N2A8 252 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 LILRB2Q8N423 598 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZNF561Q8N587 486 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZNF655Q8N720 491 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 ZNF594Q96JF6 807 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 PKP4Q99569 1192 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ITPAQ9BY32 194 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 JPH1Q9HDC5 661 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 KRCC1Q9NPI7 259 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 COL20A1Q9P218 1284 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 LIPT1Q9Y234 373 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 VPS9D1Q9Y2B5 631 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 NWD1Q149M9 1564 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MED7O43513 233 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SNNO75324 88 aaPredicted RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 IFNA17P01571 189 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 POLBP06746 335 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SNRPA1P09661 255 aaKnown RBP2.89□□□□□ -1.95
CHD9-203ENST00000447540 DNASE1P24855 282 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 CHRNA5P30532 468 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 ACSL1P33121 698 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 MAP2K3P46734 347 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 SLC36A3Q495N2 470 aa2.89□□□□□ -1.95
CHD9-203ENST00000447540 NHSL2Q5HYW2 709 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms