RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 OR2T11Q8NH01 316 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 SLC22A17Q8WUG5 538 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ESAMQ96AP7 390 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 PDLIM5Q96HC4 596 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 MAGED4Q96JG8 741 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 GLT1D1Q96MS3 346 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 CCDC115Q96NT0 180 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 SYT17Q9BSW7 474 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 C1orf50Q9BV19 199 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 UGT2B28Q9BY64 529 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 GPN2Q9H9Y4 310 aaPredicted RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 MARCH2Q9P0N8 246 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 GALPQ9UBC7 116 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 ZNF232Q9UNY5 417 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 AP3M1Q9Y2T2 418 aa9.67□□□□□ -0.86
CD44-206ENST00000415148 TNPO3Q9Y5L0 923 aaKnown RBP9.67□□□□□ -0.86
CD44-206ENST00000415148 NPEPPSL1A6NEC2 478 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 TSPAN12O95859 305 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 HTR1AP08908 422 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 GGT1P19440 569 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 CCNA2P20248 432 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 PLIN5Q00G26 463 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 PTPRNQ16849 979 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 C1QTNF12Q5T7M4 302 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 Q6ZSR9 355 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 THAP5Q7Z6K1 395 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 FAM86B1Q8N7N1 296 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 FNDC5Q8NAU1 212 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 DDHD1Q8NEL9 900 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 OR4K2Q8NGD2 314 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 PSKH2Q96QS6 385 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 TDRD1Q9BXT4 1180 aaKnown RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 ZNF408Q9H9D4 720 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 HPS4Q9NQG7 708 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 EXD2Q9NVH0 621 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 TRMT6Q9UJA5 497 aaKnown RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 SLC12A8A0AV02 714 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 MYADML2A6NDP7 307 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 SOBPA7XYQ1 873 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 MAN1A2O60476 641 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 ABCB7O75027 752 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 DNAJB5O75953 348 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 ALPLP05186 524 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 PIRTP0C851 137 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 THRBP10828 461 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 MSH3P20585 1137 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 TACR2P21452 398 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 LPOP22079 712 aaPredicted RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 EEF1B2P24534 225 aaKnown RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 MAP4P27816 1152 aaKnown RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 GSTM2P28161 218 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 THPOP40225 353 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 OPRL1P41146 370 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 HALP42357 657 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 AGTR2P50052 363 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 NKX3-2P78367 333 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 KCNC4Q03721 635 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 CHRNB3Q05901 458 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 CACNB2Q08289 660 aaPredicted RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 BFSP2Q13515 415 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 PCBP2Q15366 365 aaKnown RBP eCLIP9.66□□□□□ -0.86
CD44-206ENST00000415148 SKIV2LQ15477 1246 aaKnown RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 DPY19L1Q2PZI1 675 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 TIGD2Q4W5G0 525 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 RNF165Q6ZSG1 346 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 GLT6D1Q7Z4J2 308 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 CARNMT1Q8N4J0 409 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 ITFG1Q8TB96 612 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 RAB2BQ8WUD1 216 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 CHPT1Q8WUD6 406 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 TRUB1Q8WWH5 349 aaKnown RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 HDAC2Q92769 488 aaKnown RBP9.66□□□□□ -0.86
CD44-206ENST00000415148 KCNJ9Q92806 393 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 FBXO32Q969P5 355 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 ACOX2Q99424 681 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 CGREF1Q99674 301 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.66□□□□□ -0.86
CD44-206ENST00000415148 PCDH12Q9NPG4 1184 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 NUDT4Q9NZJ9 180 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 CD274Q9NZQ7 290 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 ASB1Q9Y576 335 aa9.66□□□□□ -0.86
CD44-206ENST00000415148 ENPP3O14638 875 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 TOR1BO14657 336 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 INSIG1O15503 277 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 KDELR3O43731 214 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 OR4F21O95013 312 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 EOMESO95936 686 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 JAK1P23458 1154 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 FSHRP23945 695 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 ERVPABLB-1P60509 514 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 GABARAPL2P60520 117 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 IFITM3Q01628 133 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 DSC1Q08554 894 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 TOP3AQ13472 1001 aaPredicted RBP9.65□□□□□ -0.86
CD44-206ENST00000415148 LAPTM5Q13571 262 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 IMPG1Q17R60 797 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 HABP4Q5JVS0 413 aaKnown RBP9.65□□□□□ -0.86
CD44-206ENST00000415148 C10orf120Q5SQS8 335 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 SDHAF4Q5VUM1 108 aa9.65□□□□□ -0.86
CD44-206ENST00000415148 GTF2IRD2BQ6EKJ0 949 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms