RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 BOP1Q14137 746 aaKnown RBP27.02■■□□□ 1.92
CPNE1-203ENST00000397442 TSNQ15631 228 aaKnown RBP27.02■■□□□ 1.92
CPNE1-203ENST00000397442 PLEKHS1Q5SXH7 462 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 C11orf96Q7Z7L8 435 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 TRAPPC5Q8IUR0 188 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 VRK3Q8IV63 474 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 BMFQ96LC9 184 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 LINC00615Q96LM1 132 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-203ENST00000397442 MID2Q9UJV3 735 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 PLXND1Q9Y4D7 1925 aa27.02■■□□□ 1.92
CPNE1-203ENST00000397442 TCP11X1B4DZS4 312 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 EIF3FO00303 357 aaPredicted RBP27.01■■□□□ 1.92
CPNE1-203ENST00000397442 BTN3A1O00481 513 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 DCXO43602 365 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 FSBPO95073 299 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 FGF3P11487 239 aaPredicted RBP27.01■■□□□ 1.92
CPNE1-203ENST00000397442 CCR3P51677 355 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 HSPA14Q0VDF9 509 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 XKR5Q6UX68 686 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 TMEM145Q8NBT3 493 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 FAM126AQ9BYI3 521 aaPredicted RBP27.01■■□□□ 1.92
CPNE1-203ENST00000397442 MANSC1Q9H8J5 431 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 OXSMQ9NWU1 459 aa27.01■■□□□ 1.92
CPNE1-203ENST00000397442 TSR3Q9UJK0 312 aaKnown RBP27.01■■□□□ 1.92
CPNE1-203ENST00000397442 MUC3AQ02505 3323 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 EML5Q05BV3 1969 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 SRRM3A6NNA2 597 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-203ENST00000397442 H0Y8X5 98 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 FPGTO14772 594 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 FUCA1P04066 466 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 AOC1P19801 751 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 CHI3L2Q15782 390 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 CRTC3Q6UUV7 619 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 GCNT7Q6ZNI0 430 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 LILRA3Q8N6C8 439 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-203ENST00000397442 OR6Y1Q8NGX8 325 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 STAG3L4Q8TBR4 150 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 LRRC8CQ8TDW0 803 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 ZBTB32Q9Y2Y4 487 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-203ENST00000397442 NCOR1O75376 2440 aa27.01■■□□□ 1.91
CPNE1-203ENST00000397442 NEMP2A6NFY4 417 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 GPR89AB7ZAQ6 455 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 KERAO60938 352 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 SLCO2B1O94956 709 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 HOXC4P09017 264 aaPredicted RBP27■■□□□ 1.91
CPNE1-203ENST00000397442 GPR89BP0CG08 455 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 ENO3P13929 434 aaPredicted RBP27■■□□□ 1.91
CPNE1-203ENST00000397442 MTHFD2P13995 350 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 PFN3P60673 137 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 ASZ1Q8WWH4 475 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 ORAI3Q9BRQ5 295 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 SLC17A4Q9Y2C5 497 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 PRKAB1Q9Y478 270 aa27■■□□□ 1.91
CPNE1-203ENST00000397442 SLC5A10A0PJK1 596 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 CCDC189A1A4V9 331 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 GMNCA6NCL1 334 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 KLF11O14901 512 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 CEACAM5P06731 702 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 AKT2P31751 481 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 ZCCHC23Q6ZST2 131 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 MYO1HQ8N1T3 1032 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 CHMP6Q96FZ7 201 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 EPN3Q9H201 632 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 INVSQ9Y283 1065 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 CACNA1IQ9P0X4 2223 aa26.99■■□□□ 1.91
CPNE1-203ENST00000397442 POP7O75817 140 aaKnown RBP26.98■■□□□ 1.91
CPNE1-203ENST00000397442 ATP5F1P24539 256 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-203ENST00000397442 PBLDP30039 288 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-203ENST00000397442 KIAA1024LP59773 190 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 SBSNQ6UWP8 590 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 LRRC34Q8IZ02 419 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 RAB3IL1Q8TBN0 382 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 UHRF1Q96T88 793 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-203ENST00000397442 FAM8A1Q9UBU6 413 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 ADAMTS6Q9UKP5 1117 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 RNF112Q9ULX5 631 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 HS3ST3A1Q9Y663 406 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 BDP1A6H8Y1 2624 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 C17orf113A0A1B0GUU1 675 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 A8MT66 165 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 CACNB4O00305 520 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-203ENST00000397442 AXIN1O15169 862 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 NEFHP12036 1026 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 DMWDQ09019 674 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 TPRG1LQ5T0D9 272 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 TRIM42Q8IWZ5 723 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 SLCO1B3Q9NPD5 702 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 DMTF1Q9Y222 760 aa26.98■■□□□ 1.91
CPNE1-203ENST00000397442 PRAMEF26H0Y7S4 382 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 TRIM13O60858 407 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 GSTM1P09488 218 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 GSTM4Q03013 218 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 BST1Q10588 318 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 PPP1R3AQ16821 1122 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 LRRTM4Q86VH4 590 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.97■■□□□ 1.91
CPNE1-203ENST00000397442 OR2L2Q8NH16 312 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 DLG3Q92796 817 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 GLMNQ92990 594 aa26.97■■□□□ 1.91
CPNE1-203ENST00000397442 SLC23A2Q9UGH3 650 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms