RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 MYRIPQ8NFW9 859 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 CAVIN3Q969G5 261 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 FAM136AQ96C01 138 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 MRRFQ96E11 262 aaKnown RBP12.44□□□□□ -0.42
SMN1-202ENST00000380707 ATXN7L3BQ96GX2 97 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 NDNQ99608 321 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 OSGEPL1Q9H4B0 414 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 NSMCE4AQ9NXX6 385 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 TAAR2Q9P1P5 351 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 GALPQ9UBC7 116 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 TBC1D29Q9UFV1 150 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 MED16Q9Y2X0 877 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 PCDHB1Q9Y5F3 818 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 PCDHGB2Q9Y5G2 931 aa12.44□□□□□ -0.42
SMN1-202ENST00000380707 C17orf113A0A1B0GUU1 675 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.43□□□□□ -0.42
SMN1-202ENST00000380707 NEMP2A6NFY4 417 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 EML2O95834 649 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 FTH1P02794 183 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 CD59P13987 128 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 RPL10P27635 214 aaKnown RBP12.43□□□□□ -0.42
SMN1-202ENST00000380707 CCR7P32248 378 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 HSD17B3P37058 310 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 CLCNKAP51800 687 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 TIAL1Q01085 375 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMN1-202ENST00000380707 DMPKQ09013 629 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 SLC14A1Q13336 389 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 RBM20Q5T481 1227 aaKnown RBP12.43□□□□□ -0.42
SMN1-202ENST00000380707 STPG1Q5TH74 334 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 METRNLQ641Q3 311 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 ZC3HC1Q86WB0 502 aaKnown RBP12.43□□□□□ -0.42
SMN1-202ENST00000380707 SPNS2Q8IVW8 549 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 SFTPA2Q8IWL1 248 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 SDR16C5Q8N3Y7 309 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 FAM46DQ8NEK8 389 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 ACVR1CQ8NER5 493 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 UBLCP1Q8WVY7 318 aaPredicted RBP12.43□□□□□ -0.42
SMN1-202ENST00000380707 CPNE1Q99829 537 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 AARSD1Q9BTE6 412 aaKnown RBP12.43□□□□□ -0.42
SMN1-202ENST00000380707 PRDM8Q9NQV8 689 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 BTBD3Q9Y2F9 522 aa12.43□□□□□ -0.42
SMN1-202ENST00000380707 H3BMM5 538 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 TRIM38O00635 465 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 SNX2O60749 519 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 KCNJ13O60928 360 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 ANXA6P08133 673 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 VCLP18206 1134 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 CHRM3P20309 590 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 AOAHP28039 575 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 GP5P40197 560 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 PREPP48147 710 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 CLCN7P51798 805 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 CDKN2DP55273 166 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 NAB1Q13506 487 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 SUZ12Q15022 739 aaKnown RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 BRD3Q15059 726 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 SEPT7Q16181 437 aaKnown RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 LVRNQ6Q4G3 990 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 GPATCH11Q8N954 259 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 HM13Q8TCT9 377 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 ELMO1Q92556 727 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 CCDC68Q9H2F9 335 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 DPEP2Q9H4A9 486 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 RHOJQ9H4E5 214 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 COG4Q9H9E3 785 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 SARS2Q9NP81 518 aaKnown RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 NLGN3Q9NZ94 848 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 TXNDC16Q9P2K2 825 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 DOLKQ9UPQ8 538 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 COMMD10Q9Y6G5 202 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 ASCC3Q8N3C0 2202 aaKnown RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 ARID1BQ8NFD5 2236 aaPredicted RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 CEP250Q9BV73 2442 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 KLHL33A6NCF5 533 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 A6NCN8 305 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 E5RI56 91 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 F8W8V4 182 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 TPP1O14773 563 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 GSTM1P09488 218 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 BRAFP15056 766 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 IDSP22304 550 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 PDHA2P29803 388 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 PGGT1BP53609 377 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 CSE1LP55060 971 aaKnown RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 GSTM4Q03013 218 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 BOP1Q14137 746 aaKnown RBP12.42□□□□□ -0.42
SMN1-202ENST00000380707 KLHL38Q2WGJ6 581 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 GRTP1Q5TC63 336 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 HECTD2Q5U5R9 776 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 OTOAQ7RTW8 1153 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 EID2Q8N6I1 236 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 OR4C6Q8NH72 309 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 KCNJ9Q92806 393 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 VPS39Q96JC1 886 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 PANX3Q96QZ0 392 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 RBBP8Q99708 897 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 SLC30A3Q99726 388 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 TSSK1BQ9BXA7 367 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 LATS2Q9NRM7 1088 aa12.42□□□□□ -0.42
SMN1-202ENST00000380707 SCHIP1Q9P0W5 487 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms