RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 CGREF1Q99674 301 aa18.87■□□□□ 0.61
TMEM53-202ENST00000372237 YTHDF1Q9BYJ9 559 aaKnown RBP18.87■□□□□ 0.61
TMEM53-202ENST00000372237 ILVBLA1L0T0 632 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 DEAF1O75398 565 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 KATNA1O75449 491 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 ATE1O95260 518 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 PLIN5Q00G26 463 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CCNYL2Q5T2Q4 361 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 KLHL35Q6PF15 583 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CHST15Q7LFX5 561 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 GOLGA7Q7Z5G4 137 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 EGFL6Q8IUX8 553 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CROCCP3Q8IVE0 287 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 OR4F6Q8NGB9 312 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 ITFG1Q8TB96 612 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 HSPBAP1Q96EW2 488 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CDK5RAP1Q96SZ6 601 aaKnown RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 ACTL8Q9H568 366 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 PLGRKTQ9HBL7 147 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 RHBDL2Q9NX52 303 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 POLR3HQ9Y535 204 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 TNPO3Q9Y5L0 923 aaKnown RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CASP8AP2Q9UKL3 1982 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 H3BMQ9 156 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 ARNTLO00327 626 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 LSM1O15116 133 aaKnown RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 GMNNO75496 209 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 GJB5O95377 273 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 F11P03951 625 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CNPP09543 421 aaKnown RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 ATF6P18850 670 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 DCKP27707 260 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 SGSHP51688 502 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CLCN7P51798 805 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 DGKQP52824 942 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 ARSFP54793 590 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 TRAF2Q12933 501 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 GTF2H2Q13888 395 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 PCBP2Q15366 365 aaKnown RBP eCLIP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 NEDD8Q15843 81 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CRY1Q16526 586 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 AP5B1Q2VPB7 878 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 ZIK1Q3SY52 487 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 FAM98BQ52LJ0 330 aaKnown RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 GTF2H2CQ6P1K8 395 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CD99L2Q8TCZ2 262 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 NUDT8Q8WV74 236 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 ABTB1Q969K4 478 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 COG8Q96MW5 612 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 NTN4Q9HB63 628 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 IFT80Q9P2H3 777 aaPredicted RBP18.86■□□□□ 0.61
TMEM53-202ENST00000372237 CDH7Q9ULB5 785 aa18.86■□□□□ 0.61
TMEM53-202ENST00000372237 H7C0S8 307 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 RAP2AP10114 183 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 PCNAP12004 261 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 NFKBIAP25963 317 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 HLCSP50747 726 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 TWF1Q12792 350 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 RFTN2Q52LD8 501 aaPredicted RBP18.85■□□□□ 0.61
TMEM53-202ENST00000372237 ADAMTSL2Q86TH1 951 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 CLEC4FQ8N1N0 589 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 STK40Q8N2I9 435 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 TERB1Q8NA31 727 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 THAP11Q96EK4 314 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 MUS81Q96NY9 551 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 OR7A17O14581 309 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 S100BP04271 92 aaPredicted RBP18.85■□□□□ 0.61
TMEM53-202ENST00000372237 ANXA6P08133 673 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 EEF1B2P24534 225 aaKnown RBP18.85■□□□□ 0.61
TMEM53-202ENST00000372237 HOXD10P28358 340 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 HMOX2P30519 316 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 ALDH3A2P51648 485 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 CHRNB3Q05901 458 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 PWP1Q13610 501 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 C16orf72Q14CZ0 275 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 AAK1Q2M2I8 961 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 RTP2Q5QGT7 225 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 TMEM26Q6ZUK4 368 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 C16orf59Q7L2K0 433 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 TTC30BQ8N4P2 665 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 PNPT1Q8TCS8 783 aaKnown RBP18.85■□□□□ 0.61
TMEM53-202ENST00000372237 TMBIM1Q969X1 311 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 DOK1Q99704 481 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 DHRS7Q9Y394 339 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 PKP3Q9Y446 797 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 PCDHGA11Q9Y5H2 935 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 ST14Q9Y5Y6 855 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 SLC30A1Q9Y6M5 507 aa18.85■□□□□ 0.61
TMEM53-202ENST00000372237 TMX2-CTNND1H3BSU7 103 aa18.84■□□□□ 0.61
TMEM53-202ENST00000372237 IFRD1O00458 451 aaPredicted RBP18.84■□□□□ 0.61
TMEM53-202ENST00000372237 RSL1D1O76021 490 aaKnown RBP18.84■□□□□ 0.61
TMEM53-202ENST00000372237 ALDH2P05091 517 aa18.84■□□□□ 0.61
TMEM53-202ENST00000372237 ELK4P28324 431 aa18.84■□□□□ 0.61
TMEM53-202ENST00000372237 SMARCB1Q12824 385 aa18.84■□□□□ 0.61
TMEM53-202ENST00000372237 ABRAXAS2Q15018 415 aa18.84■□□□□ 0.61
TMEM53-202ENST00000372237 RNF219Q5W0B1 726 aaPredicted RBP18.84■□□□□ 0.61
TMEM53-202ENST00000372237 FUT10Q6P4F1 479 aa18.84■□□□□ 0.61
TMEM53-202ENST00000372237 LINGO4Q6UY18 593 aa18.84■□□□□ 0.61
TMEM53-202ENST00000372237 REM2Q8IYK8 340 aaPredicted RBP18.84■□□□□ 0.61
TMEM53-202ENST00000372237 TTC16Q8NEE8 873 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms