RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 NAXDQ8IW45 347 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 OR2L2Q8NH16 312 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 ZDHHC1Q8WTX9 485 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 PATE1Q8WXA2 126 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 BIRC8Q96P09 236 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 TSSK1BQ9BXA7 367 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 NLGN3Q9NZ94 848 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 TXNDC16Q9P2K2 825 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 TBC1D29Q9UFV1 150 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 RABGEF1Q9UJ41 708 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 TSR3Q9UJK0 312 aaKnown RBP13.65□□□□□ -0.22
TPM3-211ENST00000368531 PCDHB1Q9Y5F3 818 aa13.65□□□□□ -0.22
TPM3-211ENST00000368531 E5RI56 91 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 TPP1O14773 563 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 FAM155BO75949 473 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 ESR1P03372 595 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 SAT1P21673 171 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 IDSP22304 550 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 MCM3P25205 808 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 GRK6P43250 576 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 PREPP48147 710 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 CD151P48509 253 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 CLCNKAP51800 687 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 UAP1Q16222 522 aaPredicted RBP13.64□□□□□ -0.23
TPM3-211ENST00000368531 INAVAQ3KP66 663 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 RBM20Q5T481 1227 aaKnown RBP13.64□□□□□ -0.23
TPM3-211ENST00000368531 LVRNQ6Q4G3 990 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 DBX2Q6ZNG2 339 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 KIAA0408Q6ZU52 694 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 TRMT10CQ7L0Y3 403 aaKnown RBP13.64□□□□□ -0.23
TPM3-211ENST00000368531 SDR16C5Q8N3Y7 309 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 OR4C6Q8NH72 309 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 HM13Q8TCT9 377 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 NETO1Q8TDF5 533 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 UBLCP1Q8WVY7 318 aaPredicted RBP13.64□□□□□ -0.23
TPM3-211ENST00000368531 LINC00615Q96LM1 132 aaPredicted RBP13.64□□□□□ -0.23
TPM3-211ENST00000368531 APOLD1Q96LR9 279 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 PANX3Q96QZ0 392 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 DUSP23Q9BVJ7 150 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 TXLNGYQ9BZA5 131 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 COG4Q9H9E3 785 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 NSMCE4AQ9NXX6 385 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 GALPQ9UBC7 116 aa13.64□□□□□ -0.23
TPM3-211ENST00000368531 CDV3Q9UKY7 258 aaKnown RBP13.64□□□□□ -0.23
TPM3-211ENST00000368531 A0A087WUV0 522 aaPredicted RBP13.63□□□□□ -0.23
TPM3-211ENST00000368531 POC1B-GALNT4F8VUJ3 575 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 H3BMM5 538 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 RIPK2O43353 540 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 KCNJ13O60928 360 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 LDOC1O95751 146 aaPredicted RBP13.63□□□□□ -0.23
TPM3-211ENST00000368531 C1QAP02745 245 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 CCR7P32248 378 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 PGGT1BP53609 377 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 LIMK1P53667 647 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 MAZP56270 477 aaKnown RBP13.63□□□□□ -0.23
TPM3-211ENST00000368531 DAB2P98082 770 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 HSPA14Q0VDF9 509 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 SYTL3Q4VX76 610 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 C6orf132Q5T0Z8 1188 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 METRNLQ641Q3 311 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 ZNF449Q6P9G9 518 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 CYS1Q717R9 158 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 SLC26A11Q86WA9 606 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 KYQ8NBH2 561 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 DEFB124Q8NES8 71 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.63□□□□□ -0.231e-8■■■■■ 76.2
TPM3-211ENST00000368531 ELMO2Q96JJ3 720 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 CNDP2Q96KP4 475 aaKnown RBP13.63□□□□□ -0.23
TPM3-211ENST00000368531 CPNE1Q99829 537 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 AARSD1Q9BTE6 412 aaKnown RBP13.63□□□□□ -0.23
TPM3-211ENST00000368531 WWP1Q9H0M0 922 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 WDR37Q9Y2I8 494 aa13.63□□□□□ -0.23
TPM3-211ENST00000368531 CFAP20Q9Y6A4 193 aaKnown RBP13.63□□□□□ -0.23
TPM3-211ENST00000368531 BPTFQ12830 3046 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 ARID1BQ8NFD5 2236 aaPredicted RBP13.62□□□□□ -0.23
TPM3-211ENST00000368531 C17orf113A0A1B0GUU1 675 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 APOA4P06727 396 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 F3P13726 295 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 AOAHP28039 575 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 PDHA2P29803 388 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 GP5P40197 560 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 ADARP55265 1226 aaKnown RBP13.62□□□□□ -0.23
TPM3-211ENST00000368531 DMPKQ09013 629 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 BIRC2Q13490 618 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 SLC29A2Q14542 456 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 CLCA4Q14CN2 919 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 RSPO4Q2I0M5 234 aaPredicted RBP13.62□□□□□ -0.23
TPM3-211ENST00000368531 CCDC157Q569K6 752 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 HECTD2Q5U5R9 776 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 ZCCHC8Q6NZY4 707 aaKnown RBP13.62□□□□□ -0.23
TPM3-211ENST00000368531 XKR5Q6UX68 686 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 OTOAQ7RTW8 1153 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 ZC3HC1Q86WB0 502 aaKnown RBP13.62□□□□□ -0.23
TPM3-211ENST00000368531 SLC35F3Q8IY50 421 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 NAGSQ8N159 534 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 SIDT2Q8NBJ9 832 aaKnown RBP13.62□□□□□ -0.23
TPM3-211ENST00000368531 ACVR1CQ8NER5 493 aa13.62□□□□□ -0.23
TPM3-211ENST00000368531 AENQ8WTP8 325 aaKnown RBP13.62□□□□□ -0.23
TPM3-211ENST00000368531 TMEM159Q96B96 161 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms