RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 TSTD2Q5T7W7 516 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 KDELC2Q7Z4H8 507 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 ARFGAP2Q8N6H7 521 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 LPCAT1Q8NF37 534 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 CALML6Q8TD86 181 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 STYXQ8WUJ0 223 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 ECHDC3Q96DC8 303 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 TMEM74Q96NL1 305 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 MAGEE1Q9HCI5 957 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 CHRAC1Q9NRG0 131 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.8■□□□□ 0.924e-7■■□□□ 12.6
SMCO4-201ENST00000298966 ANKMY1Q9P2S6 941 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 PISDQ9UG56 409 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 PHTF1Q9UMS5 762 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 ACTL7BQ9Y614 415 aa20.8■□□□□ 0.92
SMCO4-201ENST00000298966 C2orf81A6NN90 581 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 D6RAR5 112 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 POC1B-GALNT4F8VUJ3 575 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 NVLO15381 856 aaKnown RBP20.79■□□□□ 0.92
SMCO4-201ENST00000298966 HGFP14210 728 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 NR1D1P20393 614 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 PSMA3P25788 255 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 YPEL5P62699 121 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 ACVR1Q04771 509 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 SEPT6Q14141 434 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 GALNT3Q14435 633 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 TBR1Q16650 682 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 QPCTQ16769 361 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 BRAT1Q6PJG6 821 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 CTAGE3PQ8IX95 158 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 SDR16C5Q8N3Y7 309 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 ARL10Q8N8L6 244 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 CCDC74AQ96AQ1 378 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 MTBPQ96DY7 904 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 CLPBQ9H078 707 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 SUV39H2Q9H5I1 410 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 ZDHHC6Q9H6R6 413 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 ZFATQ9P243 1243 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 TXNDC16Q9P2K2 825 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 PPIL1Q9Y3C6 166 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 PCDHGA4Q9Y5G9 962 aa20.79■□□□□ 0.92
SMCO4-201ENST00000298966 KRT38O76015 456 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 CCKBRP32239 447 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 ABL2P42684 1182 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 BLKP51451 505 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 MAGOHP61326 146 aaKnown RBP20.78■□□□□ 0.92
SMCO4-201ENST00000298966 CCL7P80098 99 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 PPARDQ03181 441 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 TLE1Q04724 770 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 UGP2Q16851 508 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 MACC1Q6ZN28 852 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 KCNMB4Q86W47 210 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 FSTL5Q8N475 847 aaPredicted RBP20.78■□□□□ 0.92
SMCO4-201ENST00000298966 PAF1Q8N7H5 531 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 MFSD3Q96ES6 412 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 LYSMD1Q96S90 227 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 CPNE1Q99829 537 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 FAM167BQ9BTA0 163 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 SIRPGQ9P1W8 387 aa20.78■□□□□ 0.92
SMCO4-201ENST00000298966 TSPAN11A1L157 253 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 C16orf96A6NNT2 1141 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 LDB2O43679 373 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 RPLP0P05388 317 aaKnown RBP20.77■□□□□ 0.92
SMCO4-201ENST00000298966 ALPIP09923 528 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 NMBRP28336 390 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 IGFALSP35858 605 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 ELOCQ15369 112 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 TRMT10BQ6PF06 316 aaKnown RBP20.77■□□□□ 0.92
SMCO4-201ENST00000298966 GDPD4Q6W3E5 623 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 KIAA0408Q6ZU52 694 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 GLT6D1Q7Z4J2 308 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 VASH2Q86V25 355 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 CAMK1DQ8IU85 385 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 CNTN4Q8IWV2 1026 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 PPM1NQ8N819 430 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 BLOC1S5Q8TDH9 187 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 PDCD6IPQ8WUM4 868 aaKnown RBP20.77■□□□□ 0.92
SMCO4-201ENST00000298966 PIH1D2Q8WWB5 315 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 CENPTQ96BT3 561 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 NSMCE3Q96MG7 304 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 SLC25A18Q9H1K4 315 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 PPANQ9NQ55 473 aaKnown RBP20.77■□□□□ 0.92
SMCO4-201ENST00000298966 C20orf96Q9NUD7 363 aaPredicted RBP20.77■□□□□ 0.92
SMCO4-201ENST00000298966 DKK3Q9UBP4 350 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 GGT7Q9UJ14 662 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 PNMA8BQ9ULN7 279 aaPredicted RBP20.77■□□□□ 0.92
SMCO4-201ENST00000298966 ITM2BQ9Y287 266 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 LOXL2Q9Y4K0 774 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 PCDHB11Q9Y5F2 797 aa20.77■□□□□ 0.92
SMCO4-201ENST00000298966 A0A0J9YYE9 177 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 TOR1BO14657 336 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 TRBC1P01850 177 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 PDHA1P08559 390 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 CTSEP14091 401 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 LPOP22079 712 aaPredicted RBP20.76■□□□□ 0.91
SMCO4-201ENST00000298966 HADHAP40939 763 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 CSE1LP55060 971 aaKnown RBP20.76■□□□□ 0.91
SMCO4-201ENST00000298966 PPP2R2AP63151 447 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 LVRNQ6Q4G3 990 aa20.76■□□□□ 0.91
SMCO4-201ENST00000298966 USP45Q70EL2 814 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms