RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 REV3LO60673 3130 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 TOR1BO14657 336 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 VPS26AO75436 327 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 BCL10O95999 233 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 OCM2P0CE71 109 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 OCMP0CE72 109 aaPredicted RBP14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 HLA-DPA1P20036 260 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 SHMT2P34897 504 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 SLC26A3P40879 764 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 MTHFRP42898 656 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 GJA8P48165 433 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 RPS24P62847 133 aaKnown RBP14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 SERINC3Q13530 473 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 GALNT18Q6P9A2 607 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 SPESP1Q6UW49 350 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 TAS1R1Q7RTX1 841 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 SPRED2Q7Z698 418 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 DTWD1Q8N5C7 304 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 FAM86B1Q8N7N1 296 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 OSCP1Q8WVF1 389 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 MTFMTQ96DP5 389 aaKnown RBP14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 ZNF599Q96NL3 588 aa14.29□□□□□ -0.12
SFSWAP-201ENST00000261674 SYCE1LA8MT33 242 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 MATN4O95460 622 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 ESRRBO95718 433 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 CCNA2P20248 432 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 HRH2P25021 359 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 NFKB2Q00653 900 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 TWF1Q12792 350 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 RCAN2Q14206 197 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 DSC3Q14574 896 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 LINGO4Q6UY18 593 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 CROCCP3Q8IVE0 287 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 SLC43A3Q8NBI5 491 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 OR10A6Q8NH74 314 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 PROKR1Q8TCW9 393 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 PLEKHA8Q96JA3 519 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 BTN2A3PQ96KV6 586 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 RIC8BQ9NVN3 520 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 PTBP2Q9UKA9 531 aaKnown RBP14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 UTS2RQ9UKP6 389 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 A8MX80 341 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 DEAF1O75398 565 aaPredicted RBP14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 CLTBP09497 229 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 MC4RP32245 332 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 GDF5P43026 501 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 BMXP51813 675 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 IL2P60568 153 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 MEP1AQ16819 746 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 AP5B1Q2VPB7 878 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 CCNYL2Q5T2Q4 361 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 FAM171A1Q5VUB5 890 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 C16orf59Q7L2K0 433 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 ZDHHC13Q8IUH4 622 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 ITCHQ96J02 903 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 CINPQ9BW66 212 aaPredicted RBP14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 SELENONQ9NZV5 590 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 CHD9Q3L8U1 2897 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 C2orf81A6NN90 581 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 STX7O15400 261 aaKnown RBP14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 NDST3O95803 873 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 UROSP10746 265 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 ARSFP54793 590 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 IL10RBQ08334 325 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 PTGR1Q14914 329 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 LETMD1Q6P1Q0 360 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 SPRED1Q7Z699 444 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 NECAB2Q7Z6G3 386 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 SFRP1Q8N474 314 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 RHEBL1Q8TAI7 183 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 LZICQ8WZA0 190 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 C1orf74Q96LT6 269 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 EGFL8Q99944 293 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 CD320Q9NPF0 282 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 TUBA8Q9NY65 449 aaPredicted RBP14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 ANGPTL3Q9Y5C1 460 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 GMEB1Q9Y692 573 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 SCN5AQ14524 2016 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 RALGAPA2Q2PPJ7 1873 aa14.28□□□□□ -0.12
SFSWAP-201ENST00000261674 SPTBN5Q9NRC6 3674 aaKnown RBP14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 LCHNA4D1U4 455 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 DFNA5O60443 496 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 HTR7P34969 479 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 HK3P52790 923 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 ERVPABLB-1P60509 514 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 ERVK-8P63133 956 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 NR1D2Q14995 579 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 LAPTM4AQ15012 233 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 CTXN3Q4LDR2 81 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 ARTNQ5T4W7 220 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 PRSS55Q6UWB4 352 aaPredicted RBP14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 R3HCC1LQ7Z5L2 792 aaKnown RBP14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 SPATA19Q7Z5L4 167 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 HID1Q8IV36 788 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 MDGA1Q8NFP4 955 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 SLC39A13Q96H72 371 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 SUSD3Q96L08 255 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 PKMYT1Q99640 499 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 LRRC3Q9BY71 257 aa14.27□□□□□ -0.12
SFSWAP-201ENST00000261674 GPR62Q9BZJ7 368 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms