RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 CTSCP53634 463 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 HADHBP55084 474 aaKnown RBP10.1□□□□□ -0.79
VPS50-201ENST00000251739 WNT3AP56704 352 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 DYNLT1P63172 113 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 FOXM1Q08050 763 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 ADCY2Q08462 1091 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 TMEM115Q12893 351 aaPredicted RBP10.1□□□□□ -0.79
VPS50-201ENST00000251739 LACTB2Q53H82 288 aaPredicted RBP10.1□□□□□ -0.79
VPS50-201ENST00000251739 SIRPB2Q5JXA9 342 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 ZFYVE27Q5T4F4 411 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 FAM83HQ6ZRV2 1179 aaPredicted RBP10.1□□□□□ -0.79
VPS50-201ENST00000251739 B4GALNT4Q76KP1 1039 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 RFX6Q8HWS3 928 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 TRAPPC5Q8IUR0 188 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 RHOT1Q8IXI2 618 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 RASGEF1AQ8N9B8 481 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 ITPKCQ96DU7 683 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 ZDHHC12Q96GR4 267 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 BPIFA1Q9NP55 256 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 ABHD10Q9NUJ1 306 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 SPTLC3Q9NUV7 552 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 SMOXQ9NWM0 555 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 DDX56Q9NY93 547 aaKnown RBP10.1□□□□□ -0.79
VPS50-201ENST00000251739 UBP1Q9NZI7 540 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 HACD3Q9P035 362 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 SAE1Q9UBE0 346 aaPredicted RBP10.1□□□□□ -0.79
VPS50-201ENST00000251739 FAM153AQ9UHL3 310 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 TP53TG5Q9Y2B4 290 aa10.1□□□□□ -0.79
VPS50-201ENST00000251739 ESPL1Q14674 2120 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 IGHV5-51A0A0C4DH38 117 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 K7EM74 188 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 MTSS1O43312 755 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 MFAP3LO75121 409 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 SPAG6O75602 509 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 RASSF9O75901 435 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 TPM3P06753 285 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 VCLP18206 1134 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 SPAM1P38567 509 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 CD97P48960 835 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 PMS2P54278 862 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 DNASE1L3Q13609 305 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 CHRNA6Q15825 494 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 IGFBP7Q16270 282 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 RPE65Q16518 533 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 LDLRAP1Q5SW96 308 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 GPRC6AQ5T6X5 926 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 CACHD1Q5VU97 1274 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 ZDHHC20Q5W0Z9 365 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 TCTN3Q6NUS6 607 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 C16orf46Q6P387 395 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 FAM92BQ6ZTR7 304 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 PPP1R3BQ86XI6 285 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 VSTM4Q8IW00 320 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 ZNF567Q8N184 647 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 BRSK1Q8TDC3 778 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 CT55Q8WUE5 264 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 UBXN4Q92575 508 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 MIB2Q96AX9 1013 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 CXorf40BQ96DE9 158 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 RNF31Q96EP0 1072 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 STAMBPL1Q96FJ0 436 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 FCRL4Q96PJ5 515 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 QKIQ96PU8 341 aaKnown RBP eCLIP10.09□□□□□ -0.79
VPS50-201ENST00000251739 FCRL5Q96RD9 977 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 GORASP1Q9BQQ3 440 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 PGPEP1Q9NXJ5 209 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 ANKMY1Q9P2S6 941 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 LNPEPQ9UIQ6 1025 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 KCND3Q9UK17 655 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 INTUQ9ULD6 942 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 POLHQ9Y253 713 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 HYOU1Q9Y4L1 999 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 MYO9AB2RTY4 2548 aa10.09□□□□□ -0.79
VPS50-201ENST00000251739 ANKRD12Q6UB98 2062 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 PCM1Q15154 2024 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 hCG_1818297A0A087WSY0 165 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 TLCD2A6NGC4 264 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 C21orf140B9A014 251 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 PSTPIP1O43586 416 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 SGTAO43765 313 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 UGT1A9O60656 530 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 CST8O60676 142 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 CREG1O75629 220 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 POP7O75817 140 aaKnown RBP10.08□□□□□ -0.8
VPS50-201ENST00000251739 FOLR1P15328 257 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 UGT1A6P19224 532 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 HLA-DPA1P20036 260 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 NR1D1P20393 614 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 COMTP21964 271 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 UGT1A1P22309 533 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 UGT1A4P22310 534 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 HALP42357 657 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 MARCKSL1P49006 195 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 KLRB1Q12918 225 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 TUBB3Q13509 450 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 GTF2H3Q13889 308 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 UBAP2LQ14157 1087 aaKnown RBP10.08□□□□□ -0.8
VPS50-201ENST00000251739 TFDP2Q14188 446 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 NFE2L1Q14494 772 aa10.08□□□□□ -0.8
VPS50-201ENST00000251739 SLC1A5Q15758 541 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms