RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Serpinb5P70124 375 aaKnown RBP7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Smad5P97454 465 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Pdcd1Q02242 288 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Ano7Q14AT5 859 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Fam171bQ14CH0 825 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Sppl2bQ3TD49 578 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Ndst1Q3UHN9 882 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Q3UY34 256 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 AY761185Q5ERI8 94 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Chi3l1Q61362 389 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Sp9Q64HY3 484 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Cntn4Q69Z26 1026 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Sp140Q6NSQ5 534 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Hmgb4Q6P8W9 181 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Zpbp2Q6X786 326 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Prl3a1Q78Y73 227 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Q8BHN7 327 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Znf473Q8BI67 892 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Mapkap1Q8BKH7 522 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Hs3st3a1Q8BKN6 393 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 EmsyQ8BMB0 1264 aaKnown RBP7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Rcn2Q8BP92 320 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Clasp2Q8BRT1 1286 aaKnown RBP7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Slc43a1Q8BSM7 564 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Lig4Q8BTF7 911 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Rap2cQ8BU31 183 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Zfp398Q8BV16 643 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Fam204aQ8C6C7 236 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Kcnmb1Q8CAE3 191 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Entpd8Q8K0L2 497 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Mrpl47Q8K2Y7 252 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Clrn1Q8K445 232 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Vmn1r87Q8R255 295 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Hip1Q8VD75 1029 aaKnown RBP7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Pcdh18Q8VHR0 1134 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Rnh1Q91VI7 456 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Snx15Q91WE1 337 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 FtcdQ91XD4 541 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Vangl2Q91ZD4 521 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Lpin1Q91ZP3 924 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Fam49bQ921M7 324 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Reep3Q99KK1 254 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 PigxQ99LV7 254 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 PmpcbQ9CXT8 489 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Ttc30bQ9CY00 664 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Slamf8Q9D3G2 278 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Noxred1Q9D3S5 366 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Lrrc71Q9D3W5 558 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Clca1Q9D7Z6 913 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Prorsd1Q9D820 169 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Rsph3bQ9DA80 389 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Znrf4Q9DAH2 327 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Gpr45Q9EQQ4 373 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Lima1Q9ERG0 753 aaKnown RBP7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Il17rbQ9JIP3 499 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Tas2r105Q9JKT4 300 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Sfmbt1Q9JMD1 863 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 CasrQ9QY96 1079 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Ap4b1Q9WV76 738 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Pex11bQ9Z210 259 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Alms1Q8K4E0 3251 aa7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Gcn1E9PVA8 2671 aaKnown RBP7.11□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Olfr652B9EHE6 318 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Clip3B9EHT4 547 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Gm10720D3Z1I5 223 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Zfp963D3Z2T8 383 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Ces1bD3Z5G7 567 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Gm21293E9Q4G9 266 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Vmn2r55G3UWZ4 781 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Vmn2r5K7N788 911 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Vmn2r53L7N473 806 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Ercc2O08811 760 aaKnown RBP7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Galnt1O08912 559 aaKnown RBP7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 RaxO35602 342 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Cldn5O54942 218 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Ulk1O70405 1051 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 P01673 111 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Cyp2a4P15392 494 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Cyp2a5P20852 494 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Gjb3P28231 270 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 FynP39688 537 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Rpl10aP53026 217 aaKnown RBP7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Dsc2P55292 902 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 TdgP56581 421 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Tubgcp3P58854 905 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 StacP97306 403 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Bop1P97452 732 aaKnown RBP7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Thumpd3P97770 505 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Prdx5P99029 210 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Pyroxd1Q3TMV7 498 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Fbxo39Q5NBU5 443 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Myo1gQ5SUA5 1024 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Abcd2Q61285 741 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Il17aQ62386 158 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 PigaQ64323 485 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Arl5cQ6P068 179 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Olfr212Q7TS33 327 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Clec4b1Q7TS58 209 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Dnajc16Q80TN4 772 aa7.1□□□□□ -1.27
Ccdc47-202ENSMUST00000106865 Thnsl1Q8BH55 747 aa7.1□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms