RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Mllt3A2AM29 569 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 NuggcD3YWJ0 796 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Zbtb11G5E8B9 1050 aaKnown RBP11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 P06324 132 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rab23P35288 237 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rab17P35292 214 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Akt2Q60823 481 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Nuak2Q8BZN4 639 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Prmt5Q8CIG8 637 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Bloc1s5Q8R015 185 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fam20bQ8VCS3 409 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 TmlheQ91ZE0 421 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cyp4f3Q99N16 524 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Prl7c1Q9CRB5 251 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ints11Q9CWS4 600 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 QpctQ9CYK2 362 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tex28B1AYN9 409 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm17019K7N6W5 255 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Adam19O35674 920 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Dsg2O55111 1122 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 PrlP06879 226 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gli1P47806 1111 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ermp1Q3UVK0 898 aaKnown RBP11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc25a51Q5HZI9 298 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Nr0b2Q62227 260 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Csnk1g3Q8C4X2 424 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Lcn9Q9D267 178 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Timm50Q9D880 353 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Il22bQ9JJY8 179 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Sipa1l3G3X9J0 1776 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 CatsperbA2RTF1 1109 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mgat4eA6H684 439 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slfn9B1ARD6 910 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cldn34b1B1AZQ8 209 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ring1O35730 406 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Il3P01586 166 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Alox5P48999 674 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 PctpP53808 214 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Pip5k1bP70181 539 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mpp1P70290 466 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Itpripl2Q3UV16 535 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc39a4Q78IQ7 660 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Itln1bQ80ZA0 313 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cldn34b2Q9D9N2 209 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Dnajb2Q9QYI5 324 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 UxtQ9WTZ0 157 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ccdc166S4R181 449 aa11.74□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Sirpb1aA0A0A6YYP6 397 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 A0A286YCD0 109 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Herc6F2Z461 1003 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 MttpO08601 894 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Clec2lP0C7M9 211 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 BC030870Q3V2G4 71 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Hepacam2Q4VAH7 463 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Reep1Q8BGH4 201 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Sumf2Q8BPG6 308 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc22a19Q8VCA0 551 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Nphs2Q91X05 385 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Herpud2Q9JJC9 404 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Armc4B2RY50 1037 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Sema6aO35464 1031 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Grap2O89100 322 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 P01652 108 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 SiaeP70665 541 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Eif2ak2Q03963 515 aaKnown RBP11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 A630001G21RikQ3UTB2 229 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 C1orf109Q499E6 217 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Fam169aQ5XG69 665 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Slc30a1Q60738 503 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ccdc85bQ6PDY0 202 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cyp2r1Q6VVW9 501 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tbl3Q8C4J7 801 aaKnown RBP11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Clp1Q99LI9 425 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tmem135Q9CYV5 458 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Lsm12Q9D0R8 195 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Copg1Q9QZE5 874 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm6509A0A0J9YUV1 481 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ralgps1A2AR50 585 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm6351K9J7D1 481 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Mkln1O89050 735 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Acat3Q80X81 397 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tprg1Q8CB49 279 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Olfr525Q8VGL5 309 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Aco2Q99KI0 780 aaKnown RBP11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Tada1Q99LM9 335 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gsdmdc1Q9D8T2 487 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ndst3Q9EQH7 873 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Cngb3Q9JJZ9 694 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Nrf1Q9WU00 503 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Ubr3Q5U430 1889 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Chil5A0A0G2JDS2 431 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Gm8374L7N2A9 172 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Atn1O35126 1175 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 GscQ02591 256 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rbm15Q0VBL3 962 aaKnown RBP11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Defb23Q30KP0 166 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rrm2bQ6PEE3 351 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Rbbp8Q80YR6 893 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Prpf18Q8BM39 342 aa11.73□□□□□ -0.53
Pcif1-201ENSMUST00000041643 Lca5lQ8C0X0 741 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms