RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Igdcc4Q9EQS9 1252 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 PrebQ9WUQ2 417 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Slc25a54B1AUS6 473 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Rhox13F6YCR7 232 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Chst3O88199 472 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Icam1P13597 537 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 TfamP40630 243 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Hk3Q3TRM8 922 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ccdc177Q3UHB8 706 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Cdk15Q3V3A1 433 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Pik3r3Q64143 461 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Clec7aQ6QLQ4 244 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Rcn3Q8BH97 328 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ckap4Q8BMK4 575 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ptpn7Q8BUM3 359 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Zhx3Q8C0Q2 951 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gatad2aQ8CHY6 629 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Mmgt2Q8R3L0 123 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Olfr1346Q8VGH6 313 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ubap2Q91VX2 1132 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Q922M7 232 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Pycr2Q922Q4 320 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Lrrc4Q99PH1 652 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 PclafQ9CQX4 110 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Chrnb2Q9ERK7 501 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 B3galt4Q9Z0F0 371 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Skp2Q9Z0Z3 424 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Unc13cQ8K0T7 2210 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Sirpb1aA0A0A6YYP6 397 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 A930018M24RikB7ZMY3 218 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Vmn2r27D3YUK6 857 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Dhcr7O88455 471 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Mtnd3P03899 115 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Itgb1P09055 798 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Fgl2P12804 432 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ccnb1P24860 430 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Pabpc1P29341 636 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Csf3rP40223 837 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Brcc3P46737 291 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 CidecP56198 239 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 CtswP56203 371 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Rpl10lP86048 214 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Kcnab3P97382 249 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Psg28Q4KL66 472 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gtf2a2Q80ZM7 109 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Rgs7bpQ8BQP9 257 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 PxkQ8BX57 582 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Smco1Q8CEZ1 214 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Syne4Q8CII8 388 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Olfr589Q8VGV8 317 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 GcshQ91WK5 170 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Pcdha2Q91Y17 948 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Lactb2Q99KR3 288 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Mdm1Q9D067 708 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Cnbd2Q9D5U8 673 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ppil2Q9D787 521 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Scube2Q9JJS0 997 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Slc26a3Q9WVC8 757 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Rps6kb2Q9Z1M4 485 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Keap1Q9Z2X8 624 aaKnown RBP10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 MycsQ9Z304 431 aa10.56□□□□□ -0.72
Rnf40-201ENSMUST00000033088 A0A1L1ST33 502 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gm13089A2AGW7 455 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ttll9A2APC3 461 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Mup6A2AV72 179 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Olfr376E9Q4M1 320 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Hoxc6P10629 235 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Anxa6P14824 673 aaKnown RBP10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Atp5bP56480 529 aaKnown RBP10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 NcstnP57716 708 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Hdac2P70288 488 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Tfap2cQ61312 449 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Ldoc1Q7TPY9 151 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Kank2Q8BX02 843 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gpr21Q8BX79 349 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Kctd12bQ8C7J6 292 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Olfr1052Q8VGR8 312 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Cd209eQ91ZW7 208 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 DenrQ9CQJ6 198 aaKnown RBP10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Tmbim6Q9D2C7 237 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 M1apQ9Z0E1 529 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Plce1Q8K4S1 2282 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 4933424G06RikA0A140LIP3 267 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Vmn1r9A2RST7 299 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Rdh8D3Z6W3 317 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Vmn2r120E9PX34 856 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Vmn2r7E9PYL5 915 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Vmn2r3H3BJ88 915 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Vmn2r6H3BK29 913 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Mllt10O54826 1068 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 LckP06240 509 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Prdx3P20108 257 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gadd45aP48316 165 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 SnnP61807 88 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Mc1rQ01727 315 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Igfbp5Q07079 271 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Q32M26 199 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Lpcat1Q3TFD2 534 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Gpr149Q3UVY1 732 aa10.55□□□□□ -0.72
Rnf40-201ENSMUST00000033088 Slc39a4Q78IQ7 660 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms