RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 SLC37A2Q8TED4 501 aa16.61■□□□□ 0.25
VAT1-204ENST00000587147 SGF29Q96ES7 293 aa16.61■□□□□ 0.25
VAT1-204ENST00000587147 TCF12Q99081 682 aa16.61■□□□□ 0.25
VAT1-204ENST00000587147 OSGEPL1Q9H4B0 414 aa16.61■□□□□ 0.25
VAT1-204ENST00000587147 CATSPERZQ9NTU4 200 aa16.61■□□□□ 0.25
VAT1-204ENST00000587147 POT1Q9NUX5 634 aa16.61■□□□□ 0.25
VAT1-204ENST00000587147 SLC2A6Q9UGQ3 507 aa16.61■□□□□ 0.25
VAT1-204ENST00000587147 CDC23Q9UJX2 597 aa16.61■□□□□ 0.25
VAT1-204ENST00000587147 COL27A1Q8IZC6 1860 aaPredicted RBP16.61■□□□□ 0.25
VAT1-204ENST00000587147 SPEGQ15772 3267 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 FTH1P02794 183 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 MAZP56270 477 aaKnown RBP16.6■□□□□ 0.25
VAT1-204ENST00000587147 UBE2IP63279 158 aaKnown RBP16.6■□□□□ 0.25
VAT1-204ENST00000587147 PLOD1Q02809 727 aaPredicted RBP16.6■□□□□ 0.25
VAT1-204ENST00000587147 HHEXQ03014 270 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 RPA4Q13156 261 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 DNAJC21Q5F1R6 531 aaKnown RBP16.6■□□□□ 0.25
VAT1-204ENST00000587147 RNF187Q5TA31 235 aaPredicted RBP16.6■□□□□ 0.25
VAT1-204ENST00000587147 IZUMO3Q5VZ72 239 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 MRNIPQ6NTE8 343 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 LRRC6Q86X45 466 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 GPR150Q8NGU9 434 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 ZFPM2Q8WW38 1151 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 LRRC39Q96DD0 335 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 SNF8Q96H20 258 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 GFM1Q96RP9 751 aaKnown RBP16.6■□□□□ 0.25
VAT1-204ENST00000587147 KRT12Q99456 494 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 CCM2Q9BSQ5 444 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 TSSK1BQ9BXA7 367 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 NRSN2Q9GZP1 204 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 LRRN3Q9H3W5 708 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 FAM96AQ9H5X1 160 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.6■□□□□ 0.25
VAT1-204ENST00000587147 VPS9D1Q9Y2B5 631 aa16.6■□□□□ 0.25
VAT1-204ENST00000587147 PIKFYVEQ9Y2I7 2098 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 CCDC78A2IDD5 438 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 TMEM8BA6NDV4 472 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 LILRA5A6NI73 299 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 PDZK1P1A8MUH7 402 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 D6RAR5 112 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 CD3EAPO15446 510 aaKnown RBP16.59■□□□□ 0.25
VAT1-204ENST00000587147 TTI1O43156 1089 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 AVILO75366 819 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 USP1O94782 785 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 SEC31AO94979 1220 aaKnown RBP16.59■□□□□ 0.25
VAT1-204ENST00000587147 TTC4O95801 387 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 OR56A5P0C7T3 313 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 NMBRP28336 390 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 CDKN1CP49918 316 aaPredicted RBP16.59■□□□□ 0.25
VAT1-204ENST00000587147 CRADDP78560 199 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 CAMK2BQ13554 666 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 WHAMMP3Q1A5X7 153 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 PLA2G4EQ3MJ16 856 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 CASC4Q6P4E1 433 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 ZNF449Q6P9G9 518 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 PATE1Q8WXA2 126 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 GATA6Q92908 595 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 MFSD3Q96ES6 412 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 SIGLEC10Q96LC7 697 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 PRDM8Q9NQV8 689 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 CPNE7Q9UBL6 633 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 DKK4Q9UBT3 224 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 RABGEF1Q9UJ41 708 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 DNAJC16Q9Y2G8 782 aa16.59■□□□□ 0.25
VAT1-204ENST00000587147 A0A1W2PQM1 296 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 OR51F1A6NGY5 319 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 LIN7AO14910 233 aaPredicted RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 PPM1DO15297 605 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 SNX2O60749 519 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 CPNE6O95741 557 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 EML2O95834 649 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 TOP3BO95985 862 aaKnown RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 RPLP0P05388 317 aaKnown RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 POLBP06746 335 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 OGNP20774 298 aaKnown RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 ARCN1P48444 511 aaKnown RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 CD151P48509 253 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 ADARP55265 1226 aaKnown RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 TYSND1Q2T9J0 566 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 ANKRD20A4Q4UJ75 823 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 ZNF658BQ4V348 819 aaPredicted RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 HIBCHQ6NVY1 386 aaPredicted RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 DET1Q7L5Y6 550 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 SDCCAG8Q86SQ7 713 aaPredicted RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 SFTPA2Q8IWL1 248 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 PDIK1LQ8N165 341 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 GABPB2Q8TAK5 448 aaPredicted RBP16.58■□□□□ 0.24
VAT1-204ENST00000587147 TMEM74Q96NL1 305 aa16.58■□□□□ 0.24
VAT1-204ENST00000587147 IGHV1OR21-1A0A087WYE8 117 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 EFCAB8A8MWE9 144 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 GOLGA8MH3BSY2 632 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 PRMT5O14744 637 aaPredicted RBP16.57■□□□□ 0.24
VAT1-204ENST00000587147 VAPBO95292 243 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 VIPP01282 170 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 BRAFP15056 766 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 PGAM1P18669 254 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 RPS3P23396 243 aaKnown RBP eCLIP16.57■□□□□ 0.243e-9■■■■■ 34.9
VAT1-204ENST00000587147 ARNTP27540 789 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 NDUFS1P28331 727 aa16.57■□□□□ 0.24
VAT1-204ENST00000587147 CCKBRP32239 447 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms