RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ADARB1P78563 741 aaKnown RBP8.47□□□□□ -1.05
CCDC33-209ENST00000560565 IRF9Q00978 393 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 CHRNB3Q05901 458 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 ADIGQ0VDE8 80 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 GPR17Q13304 367 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 ITGADQ13349 1161 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 PMS2P3Q13401 168 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 ATP1A4Q13733 1029 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 DAG1Q14118 895 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 GK3PQ14409 553 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 CTXN3Q4LDR2 81 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 TECRLQ5HYJ1 363 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 ZC3H12BQ5HYM0 836 aaKnown RBP8.47□□□□□ -1.05
CCDC33-209ENST00000560565 SLX4IPQ5VYV7 408 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 PM20D1Q6GTS8 502 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 CES5AQ6NT32 575 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 TRNP1Q6NT89 227 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 SYCE2Q6PIF2 218 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 TXNDC11Q6PKC3 985 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 PAOXQ6QHF9 649 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 LARP4Q71RC2 724 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC33-209ENST00000560565 ZDHHC13Q8IUH4 622 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 ADHFE1Q8IWW8 467 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 SCUBE3Q8IX30 993 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 FAM9CQ8IZT9 166 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 LSMEM2Q8N112 164 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 EFCAB3Q8N7B9 438 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 RNF148Q8N7C7 305 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 OR52E4Q8NGH9 312 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 RHEBL1Q8TAI7 183 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 HASPINQ8TF76 798 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 SLC22A17Q8WUG5 538 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 KCTD4Q8WVF5 259 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 STARD8Q92502 1023 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 FCGR1BQ92637 280 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 FATE1Q969F0 183 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 TMIGD2Q96BF3 282 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 MARK4Q96L34 752 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 B3GALT6Q96L58 329 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 NSMCE2Q96MF7 247 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 FCRL3Q96P31 734 aaPredicted RBP8.47□□□□□ -1.05
CCDC33-209ENST00000560565 SLC2A13Q96QE2 648 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 NPY6RQ99463 290 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 SLC29A1Q99808 456 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 SMOQ99835 787 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 NEURL2Q9BR09 285 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 FEM1AQ9BSK4 669 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 APOL5Q9BWW9 433 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 PCDHAC1Q9H158 963 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 S1PR5Q9H228 398 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 ALG2Q9H553 416 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 CATSPERBQ9H7T0 1116 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 RMI1Q9H9A7 625 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 FBXO8Q9NRD0 319 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.47□□□□□ -1.05
CCDC33-209ENST00000560565 DZANK1Q9NVP4 752 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 USE1Q9NZ43 259 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 NPAP1Q9NZP6 1156 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 ZIM2Q9NZV7 527 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 WARS2Q9UGM6 360 aaKnown RBP8.47□□□□□ -1.05
CCDC33-209ENST00000560565 PACSIN3Q9UKS6 424 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 TDRKHQ9Y2W6 561 aaKnown RBP8.47□□□□□ -1.05
CCDC33-209ENST00000560565 TPRKBQ9Y3C4 175 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 TCAF1Q9Y4C2 921 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 UGT2A1Q9Y4X1 527 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 PCDHB5Q9Y5E4 795 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 CHD5Q8TDI0 1954 aa8.47□□□□□ -1.05
CCDC33-209ENST00000560565 TPRP12270 2363 aaKnown RBP8.47□□□□□ -1.05
CCDC33-209ENST00000560565 PNMA8CA0A1B0GUJ8 204 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 GOLGA8CPA6NN73 597 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 HHLA1C9JL84 531 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 BOLA2-SMG1P6H3BVE0 249 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 TAF4O00268 1085 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 CLDN5O00501 218 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 ARPC2O15144 300 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 TEX28O15482 410 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 GABBR2O75899 941 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 APOA1P02647 267 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 THRBP10828 461 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 LCP1P13796 627 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 CKMT2P17540 419 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 GPX3P22352 226 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 BDNFP23560 247 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 ADRA1BP35368 520 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 CLCN4P51793 760 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 ARHGDIAP52565 204 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 DAOAP59103 153 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 CXCR4P61073 352 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 HERVK_113P63132 956 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 CRADDP78560 199 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 ZP2Q05996 745 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 NFYCQ13952 458 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 FXNQ16595 210 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 CLPPQ16740 277 aaPredicted RBP8.46□□□□□ -1.06
CCDC33-209ENST00000560565 GEN1Q17RS7 908 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 ZNF181Q2M3W8 571 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 CYBRD1Q53TN4 286 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 TMEM198Q66K66 360 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 SLC8B1Q6J4K2 584 aa8.46□□□□□ -1.06
CCDC33-209ENST00000560565 HMBOX1Q6NT76 420 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms