RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PASD1Q8IV76 773 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 ST6GALNAC3Q8NDV1 305 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 ELMO2Q96JJ3 720 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 EXOC2Q96KP1 924 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 C9orf72Q96LT7 481 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 COQ10AQ96MF6 247 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 OR6C1Q96RD1 312 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 TUBGCP5Q96RT8 1024 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 RUFY1Q96T51 708 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 SMAD5Q99717 465 aaKnown RBP6.77□□□□□ -1.33
ATXN3-236ENST00000556220 NUDT9Q9BW91 350 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 KLC2Q9H0B6 622 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 EPB41L1Q9H4G0 881 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 SYNCQ9H7C4 482 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 KCTD5Q9NXV2 234 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 LNPEPQ9UIQ6 1025 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 RCOR1Q9UKL0 485 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 G3BP2Q9UN86 482 aaKnown RBP6.77□□□□□ -1.33
ATXN3-236ENST00000556220 HPSEQ9Y251 543 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 FARSAQ9Y285 508 aaKnown RBP6.77□□□□□ -1.33
ATXN3-236ENST00000556220 MYO7BQ6PIF6 2116 aa6.77□□□□□ -1.33
ATXN3-236ENST00000556220 MDC1Q14676 2089 aaKnown RBP6.77□□□□□ -1.33
ATXN3-236ENST00000556220 DCHS2Q6V1P9 2916 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 FITM1A5D6W6 292 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 A8MX80 341 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 RASA4BC9J798 803 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 NPIPB6E9PJ23 425 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 FAM72CH0Y354 149 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ZNF185O15231 689 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 TOX3O15405 576 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 RASA4O43374 803 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 EML2O95834 649 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 C9P02748 559 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 PLEKP08567 350 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ZGLP1P0C6A0 271 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 TEAD1P28347 426 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ADRA1BP35368 520 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 PRCPP42785 496 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 SYKP43405 635 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 MAPK9P45984 424 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 CSNK1DP48730 415 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 SEPHS1P49903 392 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 RPS18P62269 152 aaKnown RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 RPS15P62841 145 aaKnown RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 POLR2LP62875 67 aaKnown RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ART3Q13508 389 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 IL10RAQ13651 578 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 LAMB3Q13751 1172 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ACOX1Q15067 660 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 PYCR3Q53H96 274 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 FAM72AQ5TYM5 149 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ATL3Q6DD88 541 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 FAM72DQ6L9T8 149 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 FAM199XQ6PEV8 388 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 IYDQ6PHW0 289 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 BNC2Q6ZN30 1099 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ENOSF1Q7L5Y1 443 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 SLC9B2Q86UD5 537 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 FAM72BQ86X60 149 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 PPP1R3BQ86XI6 285 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ZNF354CQ86Y25 554 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 CBARPQ8N350 705 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 GLIS1Q8NBF1 620 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ECHDC3Q96DC8 303 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 NUS1Q96E22 293 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 OR2M4Q96R27 311 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 TBC1D10AQ9BXI6 508 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 MAGEB5Q9BZ81 275 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 STN1Q9H668 368 aaKnown RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 NOL6Q9H6R4 1146 aaKnown RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ATP13A3Q9H7F0 1226 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 AKIRIN1Q9H9L7 192 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 SP110Q9HB58 689 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 GPR83Q9NYM4 423 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 C5AR2Q9P296 337 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 COPG2Q9UBF2 871 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 CFAP45Q9UL16 551 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 NEU3Q9UQ49 428 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 B3GNT3Q9Y2A9 372 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 KLF2Q9Y5W3 355 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 COPG1Q9Y678 874 aaKnown RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 ZGRF1Q86YA3 2104 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 CROCCQ5TZA2 2017 aa6.76□□□□□ -1.33
ATXN3-236ENST00000556220 MN1Q10571 1320 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-236ENST00000556220 DOCK4Q8N1I0 1966 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 A6NL46 340 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 BECN2A8MW95 431 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 ETV2O00321 342 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-236ENST00000556220 TMEM63AO94886 807 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 SERPINA4P29622 427 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 HNRNPH3P31942 346 aaKnown RBP6.75□□□□□ -1.33
ATXN3-236ENST00000556220 FLT3P36888 993 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 USP8P40818 1118 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 GABRB2P47870 512 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 GFERP55789 205 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 YBEYP58557 167 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-236ENST00000556220 LRRC63Q05C16 580 aa6.75□□□□□ -1.33
ATXN3-236ENST00000556220 COBLL1Q53SF7 1204 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms