RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 OTOGQ6ZRI0 2925 aa7.64□□□□□ -1.19
ABCD4-220ENST00000553998 ZFHX3Q15911 3703 aa7.64□□□□□ -1.19
ABCD4-220ENST00000553998 POLR1CO15160 346 aaPredicted RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 PSMD3O43242 534 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 RFPL1O75677 317 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 SORBS2O94875 1100 aaKnown RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 PGLSO95336 258 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 GAS8O95995 478 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 IFNB1P01574 187 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 MMP2P08253 660 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 FURINP09958 794 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 ANKRD34CP0C6C1 535 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 NFKB1P19838 968 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 FDFT1P37268 417 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 COILP38432 576 aaPredicted RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 CD86P42081 329 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 PMS2P54278 862 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 GEMP55040 296 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 GDF10P55107 478 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 CDK18Q07002 472 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 CKAP4Q07065 602 aaKnown RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 TRAF2Q12933 501 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 MPP3Q13368 585 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 SNX1Q13596 522 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 WHAMMP3Q1A5X7 153 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 ZNF787Q6DD87 383 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 C16orf46Q6P387 395 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 ARHGEF18Q6ZSZ5 1173 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 MAMDC2Q7Z304 686 aaPredicted RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 KDELC2Q7Z4H8 507 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 SFRP1Q8N474 314 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 EFCAB3Q8N7B9 438 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 OR10G6Q8NH81 332 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 CCDC110Q8TBZ0 833 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 CCHCR1Q8TD31 782 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 GRK7Q8WTQ7 553 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 PTCD2Q8WV60 388 aaKnown RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 SLCO2A1Q92959 643 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 CAPZA3Q96KX2 299 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 NSMCE3Q96MG7 304 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 SRPK1Q96SB4 655 aaKnown RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 CTRCQ99895 268 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 ADGRE3Q9BY15 652 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 APMAPQ9HDC9 416 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 SIDT1Q9NXL6 827 aaKnown RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 SMARCAL1Q9NZC9 954 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 MOSPD1Q9UJG1 213 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 PHTF1Q9UMS5 762 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 POLHQ9Y253 713 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 PPIL1Q9Y3C6 166 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 PCDHB3Q9Y5E6 796 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 PCDHGC4Q9Y5F7 938 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 MRPS18BQ9Y676 258 aaKnown RBP7.63□□□□□ -1.19
ABCD4-220ENST00000553998 RPS6KL1Q9Y6S9 549 aa7.63□□□□□ -1.19
ABCD4-220ENST00000553998 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 LOC285095A0A1B0GVY8 99 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 TTC24A2A3L6 582 aaPredicted RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 TTLL8A6PVC2 850 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 ERI2A8K979 691 aaKnown RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 ZNF500O60304 480 aaPredicted RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 URI1O94763 535 aaPredicted RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 NDST3O95803 873 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 CLDN1O95832 211 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 CPP00450 1065 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 PRLP01236 227 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 HLA-DPA1P20036 260 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 ELAVL4P26378 380 aaKnown RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 DEKP35659 375 aaKnown RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 ACTR1BP42025 376 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 TNNT3P45378 269 aaPredicted RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 GNPDA1P46926 289 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 KCNJ1P48048 391 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 EPHA4P54764 986 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 WNT3AP56704 352 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 RIPPLY3P57055 190 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 ACTR1AP61163 376 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 CDK3Q00526 305 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 DPTQ07507 201 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 BIRC2Q13490 618 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 SEMA5AQ13591 1074 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 IHHQ14623 411 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 CCDC70Q6NSX1 233 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 CCDC137Q6PK04 289 aaKnown RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 SLC30A9Q6PML9 568 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 KDELC1Q6UW63 502 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 SYDE1Q6ZW31 735 aaPredicted RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 USP45Q70EL2 814 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 GSTA5Q7RTV2 222 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 LYSMD3Q7Z3D4 306 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 ZNF572Q7Z3I7 529 aaPredicted RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 NLRP8Q86W28 1048 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 PAF1Q8N7H5 531 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 SPATA4Q8NEY3 305 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 PIH1D2Q8WWB5 315 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 ZNF592Q92610 1267 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 NUS1Q96E22 293 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 DTD2Q96FN9 168 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 SCRN2Q96FV2 425 aa7.62□□□□□ -1.19
ABCD4-220ENST00000553998 OXNAD1Q96HP4 312 aaPredicted RBP7.62□□□□□ -1.19
ABCD4-220ENST00000553998 MCCC1Q96RQ3 725 aaPredicted RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms