RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 SNF8Q96H20 258 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 SIGLEC10Q96LC7 697 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 ZNF778Q96MU6 729 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 KRT12Q99456 494 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 CCDC3Q9BQI4 270 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.18□□□□□ -0.94
CHD8-206ENST00000553870 LRRN3Q9H3W5 708 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 EPB41L1Q9H4G0 881 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 FAM96AQ9H5X1 160 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 CATSPERZQ9NTU4 200 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 SYBUQ9NX95 663 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 CLCA2Q9UQC9 943 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 RNF215Q9Y6U7 377 aa9.18□□□□□ -0.94
CHD8-206ENST00000553870 ARHGEF17Q96PE2 2063 aaPredicted RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 ZNF106Q9H2Y7 1883 aaKnown RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 OR2AG2A6NM03 316 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 EFCAB8A8MWE9 144 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 GOLGA8MH3BSY2 632 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 PPM1DO15297 605 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 CD3EAPO15446 510 aaKnown RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 TTI1O43156 1089 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 SGTAO43765 313 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 SNX2O60749 519 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 URI1O94763 535 aaPredicted RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 USP1O94782 785 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 POLBP06746 335 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 OR56A5P0C7T3 313 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 NMBRP28336 390 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 TERF1P54274 439 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 EPHA4P54764 986 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 DRG2P55039 364 aaKnown RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 ADARP55265 1226 aaKnown RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 MAZP56270 477 aaKnown RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 CRADDP78560 199 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 GPLD1P80108 840 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 SPIDRQ14159 915 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 ANKRD20A4Q4UJ75 823 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 RNF187Q5TA31 235 aaPredicted RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 HES3Q5TGS1 186 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 IZUMO3Q5VZ72 239 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 HIBCHQ6NVY1 386 aaPredicted RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 CASC4Q6P4E1 433 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 RBM44Q6ZP01 1051 aaKnown RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 LRRC6Q86X45 466 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 MNS1Q8NEH6 495 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 KIF18AQ8NI77 898 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 HM13Q8TCT9 377 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 CALML6Q8TD86 181 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 SLC37A2Q8TED4 501 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 MFSD3Q96ES6 412 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 DEPDC7Q96QD5 511 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 SLC38A3Q99624 504 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 ERP44Q9BS26 406 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 CARD6Q9BX69 1037 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 TSSK1BQ9BXA7 367 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 OSGEPL1Q9H4B0 414 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 PRDM8Q9NQV8 689 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 POT1Q9NUX5 634 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 WHRNQ9P202 907 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 CPNE7Q9UBL6 633 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 DNAJC16Q9Y2G8 782 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 UTP11Q9Y3A2 253 aaKnown RBP9.17□□□□□ -0.94
CHD8-206ENST00000553870 RPS6KL1Q9Y6S9 549 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 FAM169AQ9Y6X4 670 aa9.17□□□□□ -0.94
CHD8-206ENST00000553870 ASXL3Q9C0F0 2248 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 CCDC78A2IDD5 438 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 OR51F1A6NGY5 319 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 PDZK1P1A8MUH7 402 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 PRMT5O14744 637 aaPredicted RBP9.16□□□□□ -0.94
CHD8-206ENST00000553870 LIN7AO14910 233 aaPredicted RBP9.16□□□□□ -0.94
CHD8-206ENST00000553870 KPNA5O15131 536 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 B4GAT1O43505 415 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 NDUFS3O75489 264 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 SEC31AO94979 1220 aaKnown RBP9.16□□□□□ -0.94
CHD8-206ENST00000553870 VAPBO95292 243 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 CPNE6O95741 557 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 EML2O95834 649 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 VIPP01282 170 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 FTH1P02794 183 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 PGAM1P18669 254 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 OGNP20774 298 aaKnown RBP9.16□□□□□ -0.94
CHD8-206ENST00000553870 RPS3P23396 243 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHD8-206ENST00000553870 NDUFS1P28331 727 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 ARCN1P48444 511 aaKnown RBP9.16□□□□□ -0.94
CHD8-206ENST00000553870 CD151P48509 253 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 ARL4CP56559 192 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 UBE2IP63279 158 aaKnown RBP9.16□□□□□ -0.94
CHD8-206ENST00000553870 HHEXQ03014 270 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 CAV1Q03135 178 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 CALCOCO2Q13137 446 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 TARDBPQ13148 414 aaKnown RBP eCLIP9.16□□□□□ -0.94
CHD8-206ENST00000553870 NEPROQ6NW34 567 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 DET1Q7L5Y6 550 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 SPRED1Q7Z699 444 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 CFAP206Q8IYR0 622 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 CLDN19Q8N6F1 224 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 PATE1Q8WXA2 126 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 STAMBPL1Q96FJ0 436 aa9.16□□□□□ -0.94
CHD8-206ENST00000553870 TMEM74Q96NL1 305 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms