RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 HALP42357 657 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 GPR3P46089 330 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 MAZP56270 477 aaKnown RBP16.82■□□□□ 0.28
FGFR1-239ENST00000533619 INSM1Q01101 510 aaPredicted RBP16.82■□□□□ 0.28
FGFR1-239ENST00000533619 C2orf54Q08AI8 447 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 PERM1Q5SV97 790 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 METRNLQ641Q3 311 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 KIAA0930Q6ICG6 404 aaPredicted RBP16.82■□□□□ 0.28
FGFR1-239ENST00000533619 MRNIPQ6NTE8 343 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 HIBCHQ6NVY1 386 aaPredicted RBP16.82■□□□□ 0.28
FGFR1-239ENST00000533619 ZNF449Q6P9G9 518 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 TMEM135Q86UB9 458 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 CCNJLQ8IV13 435 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 MNS1Q8NEH6 495 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 CCM2Q9BSQ5 444 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 SCNM1Q9BWG6 230 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 SARS2Q9NP81 518 aaKnown RBP16.82■□□□□ 0.28
FGFR1-239ENST00000533619 PRDM8Q9NQV8 689 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 CLCA2Q9UQC9 943 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 RPS6KL1Q9Y6S9 549 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 RNF215Q9Y6U7 377 aa16.82■□□□□ 0.28
FGFR1-239ENST00000533619 TRBV23OR9-2A0A075B6M9 112 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 SGTAO43765 313 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 TCEA3O75764 348 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 USP1O94782 785 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 EML2O95834 649 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 OR56A5P0C7T3 313 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 ITGA8P53708 1063 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 CALCOCO2Q13137 446 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 ANKRD20A4Q4UJ75 823 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 HES3Q5TGS1 186 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 CES3Q6UWW8 571 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 ZNF438Q7Z4V0 828 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 SFTPA2Q8IWL1 248 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 HM13Q8TCT9 377 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 SLC37A2Q8TED4 501 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 PATE1Q8WXA2 126 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 STAMBPL1Q96FJ0 436 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 TCF12Q99081 682 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.81■□□□□ 0.28
FGFR1-239ENST00000533619 TRIM31Q9BZY9 425 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 WHRNQ9P202 907 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 SNX24Q9Y343 169 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 UTP11Q9Y3A2 253 aaKnown RBP16.81■□□□□ 0.28
FGFR1-239ENST00000533619 MSRB2Q9Y3D2 182 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 UNC13CQ8NB66 2214 aa16.81■□□□□ 0.28
FGFR1-239ENST00000533619 BPTFQ12830 3046 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 PPM1DO15297 605 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 RAD51CO43502 376 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 NDUFS3O75489 264 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 TTC4O95801 387 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 MT-CO3P00414 261 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 FTH1P02794 183 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 RPL10P27635 214 aaKnown RBP16.8■□□□□ 0.28
FGFR1-239ENST00000533619 PBLDP30039 288 aaPredicted RBP16.8■□□□□ 0.28
FGFR1-239ENST00000533619 HHEXQ03014 270 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 THOC5Q13769 683 aaKnown RBP16.8■□□□□ 0.28
FGFR1-239ENST00000533619 SPIDRQ14159 915 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 NR1D2Q14995 579 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 CLPPQ16740 277 aaPredicted RBP16.8■□□□□ 0.28
FGFR1-239ENST00000533619 CDCP2Q5VXM1 449 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 RBM12BQ8IXT5 1001 aaKnown RBP16.8■□□□□ 0.28
FGFR1-239ENST00000533619 LMNTD2Q8IXW0 634 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 CFAP206Q8IYR0 622 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 CLDN19Q8N6F1 224 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 OTUD6BQ8N6M0 293 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 GPR150Q8NGU9 434 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 GABPB2Q8TAK5 448 aaPredicted RBP16.8■□□□□ 0.28
FGFR1-239ENST00000533619 ZNF669Q96BR6 464 aaPredicted RBP16.8■□□□□ 0.28
FGFR1-239ENST00000533619 GRAMD1AQ96CP6 724 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 LRRC39Q96DD0 335 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 DEPDC7Q96QD5 511 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 SLC38A3Q99624 504 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 EBNA1BP2Q99848 306 aaKnown RBP16.8■□□□□ 0.28
FGFR1-239ENST00000533619 TSSK1BQ9BXA7 367 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 LRRN3Q9H3W5 708 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 CPNE7Q9UBL6 633 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 VPS9D1Q9Y2B5 631 aa16.8■□□□□ 0.28
FGFR1-239ENST00000533619 PRMT5O14744 637 aaPredicted RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 TOP3BO95985 862 aaKnown RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 VIPP01282 170 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 PGAM1P18669 254 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 RPL21P46778 160 aaKnown RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 ARCN1P48444 511 aaKnown RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 ARL4CP56559 192 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 DHX9Q08211 1270 aaKnown RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 RPA4Q13156 261 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 NFE2L1Q14494 772 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 SEPT7Q16181 437 aaKnown RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 HIF1AQ16665 826 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 BBS9Q3SYG4 887 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 RNF187Q5TA31 235 aaPredicted RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 NEPROQ6NW34 567 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 CCNI2Q6ZMN8 369 aaPredicted RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 RBM44Q6ZP01 1051 aaKnown RBP16.79■□□□□ 0.28
FGFR1-239ENST00000533619 SPRED1Q7Z699 444 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 LRRC6Q86X45 466 aa16.79■□□□□ 0.28
FGFR1-239ENST00000533619 TRIM48Q8IWZ4 208 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms