RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 IZUMO3Q5VZ72 239 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 METRNLQ641Q3 311 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 ABRAXAS1Q6UWZ7 409 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 WASH2PQ6VEQ5 465 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 PACS1Q6VY07 963 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 MAATS1Q7Z4T9 603 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 ZNF438Q7Z4V0 828 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 HOOK3Q86VS8 718 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 CCNJLQ8IV13 435 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 BEND7Q8N7W2 519 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 DCBLD1Q8N8Z6 715 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 Q8N9G6 341 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 AVL9Q8NBF6 648 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 LRRN4CLQ8ND94 238 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 OR2L2Q8NH16 312 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 SLC37A2Q8TED4 501 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 SH3KBP1Q96B97 665 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 MFSD3Q96ES6 412 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 LINC00615Q96LM1 132 aaPredicted RBP7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 CCM2Q9BSQ5 444 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 LRRN3Q9H3W5 708 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 STN1Q9H668 368 aaKnown RBP7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 WASH6PQ9NQA3 447 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 PRDM8Q9NQV8 689 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 CATSPERZQ9NTU4 200 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 CPNE7Q9UBL6 633 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 RABGEF1Q9UJ41 708 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 ACSL5Q9ULC5 683 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 CLCA2Q9UQC9 943 aa7.03□□□□□ -1.28
PDLIM5-215ENST00000511586 CACNA1AO00555 2505 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SPTBN2O15020 2390 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 FAM237BA0A1B0GVD1 139 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 FAM149AA5PLN7 773 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 PRR19A6NJB7 356 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 NTN3O00634 580 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 NDC80O14777 642 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CD3EAPO15446 510 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 B4GAT1O43505 415 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 FTH1P02794 183 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 RPLP0P05388 317 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 BRAFP15056 766 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 XRCC1P18887 633 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 ALDH4A1P30038 563 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 HALP42357 657 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 MAGEA3P43357 314 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 TTPAP49638 278 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 DRG2P55039 364 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CLDN6P56747 220 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 TUBB4BP68371 445 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 NFE2L1Q14494 772 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 NR1D2Q14995 579 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CLCA4Q14CN2 919 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 MORF4L2Q15014 288 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SEPT7Q16181 437 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 ERCC6LQ2NKX8 1250 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 ANKRD20A4Q4UJ75 823 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 DNAJC21Q5F1R6 531 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 MRNIPQ6NTE8 343 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 HIBCHQ6NVY1 386 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 ZNF449Q6P9G9 518 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CES3Q6UWW8 571 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 RBM44Q6ZP01 1051 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 MICALCLQ6ZW33 695 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 ZNF572Q7Z3I7 529 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SPRED1Q7Z699 444 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SDCCAG8Q86SQ7 713 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 TMEM135Q86UB9 458 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 MARCH9Q86YJ5 346 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 TRIM48Q8IWZ4 208 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CFAP206Q8IYR0 622 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 MPP5Q8N3R9 675 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CLDN19Q8N6F1 224 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 BBOF1Q8ND07 529 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 NAT14Q8WUY8 206 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 GRAMD1AQ96CP6 724 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CXorf40BQ96DE9 158 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 CCDC97Q96F63 343 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 STAMBPL1Q96FJ0 436 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SNF8Q96H20 258 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SIGLEC10Q96LC7 697 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 DEPDC7Q96QD5 511 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 GFM1Q96RP9 751 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SLC38A3Q99624 504 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 TRIM51Q9BSJ1 452 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 TRIM31Q9BZY9 425 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SYNDIG1Q9H7V2 258 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 SARS2Q9NP81 518 aaKnown RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 ARGLU1Q9NWB6 273 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 MAD1L1Q9Y6D9 718 aa7.02□□□□□ -1.29
PDLIM5-215ENST00000511586 A0A1W2PQM1 296 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 OR52A4PA6NMU1 304 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 TMX2-CTNND1H3BSU7 103 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 PFDN6O15212 129 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 OR1I1O60431 355 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 CSO75390 466 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 NDUFS3O75489 264 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 USP1O94782 785 aa7.01□□□□□ -1.29
PDLIM5-215ENST00000511586 SEC31AO94979 1220 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms