RNA–Protein interactions for RNA: ENST00000502804.2

CXCL1P1-201, Transcript of C-X-C motif chemokine ligand 1 pseudogene 1, humanhuman

BASIC

Gene CXCL1P1, Length 216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P1-201ENST00000502804 AVL9Q8NBF6 648 aa16.66■□□□□ 0.26
CXCL1P1-201ENST00000502804 ZNF669Q96BR6 464 aaPredicted RBP16.66■□□□□ 0.26
CXCL1P1-201ENST00000502804 SYNDIG1Q9H7V2 258 aa16.66■□□□□ 0.26
CXCL1P1-201ENST00000502804 VPS37BQ9H9H4 285 aa16.66■□□□□ 0.26
CXCL1P1-201ENST00000502804 WASH6PQ9NQA3 447 aa16.66■□□□□ 0.26
CXCL1P1-201ENST00000502804 CLCA2Q9UQC9 943 aa16.66■□□□□ 0.26
CXCL1P1-201ENST00000502804 RPS6KL1Q9Y6S9 549 aa16.66■□□□□ 0.26
CXCL1P1-201ENST00000502804 PPM1DO15297 605 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 SEC31AO94979 1220 aaKnown RBP16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 MT-CO3P00414 261 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 HALP42357 657 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 TTPAP49638 278 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 ITGA8P53708 1063 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 DRG2P55039 364 aaKnown RBP16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 HHEXQ03014 270 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 TUBB2AQ13885 445 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 SEMA3AQ14563 771 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 ANKRD20A4Q4UJ75 823 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 METRNLQ641Q3 311 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 FAM83HQ6ZRV2 1179 aaPredicted RBP16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 ZNF438Q7Z4V0 828 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 TMEM135Q86UB9 458 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 CCNJLQ8IV13 435 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 PDIK1LQ8N165 341 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 CACTIN-AS1Q8N1I8 211 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 AGGF1Q8N302 714 aaeCLIP16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 OTUD6BQ8N6M0 293 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 BBOF1Q8ND07 529 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 KIF18AQ8NI77 898 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 SH3KBP1Q96B97 665 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 STAMBPL1Q96FJ0 436 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 ERP44Q9BS26 406 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 CCM2Q9BSQ5 444 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 TUBB2BQ9BVA1 445 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 LRRN3Q9H3W5 708 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 SARS2Q9NP81 518 aaKnown RBP16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 SCHIP1Q9P0W5 487 aaPredicted RBP16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 MARCH4Q9P2E8 410 aaPredicted RBP16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 FAM8A1Q9UBU6 413 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 SNX24Q9Y343 169 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 MSRB2Q9Y3D2 182 aa16.65■□□□□ 0.26
CXCL1P1-201ENST00000502804 C17orf113A0A1B0GUU1 675 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 FAM149AA5PLN7 773 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 F8W8V4 182 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 OR1I1O60431 355 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 TCEA3O75764 348 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 USP1O94782 785 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 RPLP0P05388 317 aaKnown RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 POLBP06746 335 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 GSTM1P09488 218 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 OR56A5P0C7T3 313 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 BRAFP15056 766 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 XRCC1P18887 633 aaPredicted RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 ARNTP27540 789 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 ALDH4A1P30038 563 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 GPR3P46089 330 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 RPL21P46778 160 aaKnown RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 CCL7P80098 99 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 GSTM4Q03013 218 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 DHX9Q08211 1270 aaKnown RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 SPIDRQ14159 915 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 NR1D2Q14995 579 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 CDCP2Q5VXM1 449 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 MRNIPQ6NTE8 343 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 SPRED1Q7Z699 444 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 SDCCAG8Q86SQ7 713 aaPredicted RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 LDB1Q86U70 411 aaPredicted RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 TRIM48Q8IWZ4 208 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 CFAP206Q8IYR0 622 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 HM13Q8TCT9 377 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 FCRL3Q96P31 734 aaPredicted RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 DEPDC7Q96QD5 511 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 GFM1Q96RP9 751 aaKnown RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 TRIM56Q9BRZ2 755 aaKnown RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 CPNE7Q9UBL6 633 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 ACSL5Q9ULC5 683 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 PSMD13Q9UNM6 376 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 UTP11Q9Y3A2 253 aaKnown RBP16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 MRFAP1Q9Y605 127 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 PRSS21Q9Y6M0 314 aa16.64■□□□□ 0.25
CXCL1P1-201ENST00000502804 SPTBN2O15020 2390 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 A0A1W2PQM1 296 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 GOLGA8KD6RF30 607 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 GOLGA8TH3BQL2 631 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 NTN3O00634 580 aaPredicted RBP16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 PFDN6O15212 129 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 B4GAT1O43505 415 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 NDUFS3O75489 264 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 VIPP01282 170 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 FTH1P02794 183 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 PGAM1P18669 254 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 ARCN1P48444 511 aaKnown RBP16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 ARL4CP56559 192 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 OR1D5P58170 312 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 CALCOCO2Q13137 446 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 TARDBPQ13148 414 aaKnown RBP eCLIP16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 BBS9Q3SYG4 887 aa16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 CCNI2Q6ZMN8 369 aaPredicted RBP16.63■□□□□ 0.25
CXCL1P1-201ENST00000502804 RBM44Q6ZP01 1051 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms