RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 SQORQ9Y6N5 450 aa17.44■□□□□ 0.38
NPHP4-209ENST00000489180 ATG13O75143 517 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 IFNGP01579 166 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 SLC1A2P43004 574 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 DCAF12L1Q5VU92 463 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 TCAIMQ8N3R3 496 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 SLC43A3Q8NBI5 491 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 FBXL21Q9UKT6 434 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 TELO2Q9Y4R8 837 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 FADS2P1A8MWK0 482 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 ITM2AO43736 263 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 MTHFD1P11586 935 aaKnown RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 CCR10P46092 362 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 CPNE9Q8IYJ1 553 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 TTC29Q8NA56 475 aaPredicted RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 ZNF563Q8TA94 476 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 SLC9A6Q92581 669 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 TOP1MTQ969P6 601 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 SLC25A51Q9H1U9 297 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 PIGUQ9H490 435 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 ZDHHC18Q9NUE0 388 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 TMLHEQ9NVH6 421 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 PDE10AQ9Y233 779 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 RGS20O76081 388 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 GPIP06744 558 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 PRKAR2AP13861 404 aaKnown RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 SDC2P34741 201 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 WDR4P57081 412 aaKnown RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 SF1Q15637 639 aaKnown RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 PSMG2Q969U7 264 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 NIFKQ9BYG3 293 aaKnown RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 FKBPLQ9UIM3 349 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 IRAK3Q9Y616 596 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 COL1A2P08123 1366 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 GRM6O15303 877 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 ECT2LQ008S8 904 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 TMEM198Q66K66 360 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 IFNLR1Q8IU57 520 aaPredicted RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 CACNG4Q9UBN1 327 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 PLK4O00444 970 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 CXCR6O00574 342 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 ADH1AP07327 375 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 CLK3P49761 638 aaKnown RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 ELP6Q0PNE2 266 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 SLC9A4Q6AI14 798 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 TMPRSS11AQ6ZMR5 421 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 OAFQ86UD1 273 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 ROPN1LQ96C74 230 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 TRNT1Q96Q11 434 aaKnown RBP17.43■□□□□ 0.38
NPHP4-209ENST00000489180 AIF1LQ9BQI0 150 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 EXD2Q9NVH0 621 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 SLC27A6Q9Y2P4 619 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 GRIN2DO15399 1336 aa17.43■□□□□ 0.38
NPHP4-209ENST00000489180 FAM86C2PA6NEL3 165 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 WWP2O00308 870 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 DHFRP00374 187 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 S100A9P06702 114 aaKnown RBP17.42■□□□□ 0.38
NPHP4-209ENST00000489180 PSMA1P25786 263 aaKnown RBP17.42■□□□□ 0.38
NPHP4-209ENST00000489180 ASPAP45381 313 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 CASP9P55211 416 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 DCST1Q5T197 706 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 CRYBG2Q8N1P7 616 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 GSDMCQ9BYG8 508 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 MIOSQ9NXC5 875 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 SUCOQ9UBS9 1254 aaKnown RBP17.42■□□□□ 0.38
NPHP4-209ENST00000489180 IKZF2Q9UKS7 526 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 MAFBQ9Y5Q3 323 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-209ENST00000489180 C9IYK1 514 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 NDUFS2O75306 463 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 KRT33AO76009 404 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 MYCLP1P12525 358 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-209ENST00000489180 GJA9P57773 515 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 ALG11Q2TAA5 492 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 SERPINA9Q86WD7 417 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 GFM1Q96RP9 751 aaKnown RBP17.42■□□□□ 0.38
NPHP4-209ENST00000489180 CNTN6Q9UQ52 1028 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 DISP2A7MBM2 1401 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 CDK14O94921 469 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 SEMA3DO95025 777 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 VNN1O95497 513 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 IFNW1P05000 195 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 UNGP13051 313 aaPredicted RBP17.42■□□□□ 0.38
NPHP4-209ENST00000489180 HTR1BP28222 390 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 TGFBR2P37173 567 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 AKR1D1P51857 326 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 TAS2R39P59534 338 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 HSPB3Q12988 150 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 UNC5BQ8IZJ1 945 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 ZNF248Q8NDW4 579 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 ZNF570Q96NI8 536 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 SP140LQ9H930 580 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 DTLQ9NZJ0 730 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 ARL5AQ9Y689 179 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 IRGMA1A4Y4 181 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 DUSP28Q4G0W2 176 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 ZNF697Q5TEC3 545 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 BICRALQ6AI39 1079 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 DNASE1L2Q92874 299 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 KLRG1Q96E93 195 aa17.42■□□□□ 0.38
NPHP4-209ENST00000489180 CPSF4LA6NMK7 179 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms