RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 CLEC18CQ8NCF0 446 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 SPATA22Q8NHS9 363 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.07□□□□□ -1.28
UBE4B-208ENST00000475795 KLHL6Q8WZ60 621 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 CXorf40BQ96DE9 158 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 STAMBPL1Q96FJ0 436 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 SRPK1Q96SB4 655 aaKnown RBP7.07□□□□□ -1.28
UBE4B-208ENST00000475795 MAK16Q9BXY0 300 aaKnown RBP7.07□□□□□ -1.28
UBE4B-208ENST00000475795 XPO4Q9C0E2 1151 aaKnown RBP7.07□□□□□ -1.28
UBE4B-208ENST00000475795 RAB33BQ9H082 229 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 GLOD4Q9HC38 313 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 SLC40A1Q9NP59 571 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 EPHA6Q9UF33 1036 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 FKBPLQ9UIM3 349 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 KCND3Q9UK17 655 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 TMPRSS11EQ9UL52 423 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 POLHQ9Y253 713 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 TP53TG5Q9Y2B4 290 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 PCDHGA6Q9Y5G7 932 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 SPO11Q9Y5K1 396 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 KCNMB2Q9Y691 235 aa7.07□□□□□ -1.28
UBE4B-208ENST00000475795 FER1L5A0AVI2 2057 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 ANKRD12Q6UB98 2062 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 A0A0A6YYK5 440 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-208ENST00000475795 SYCE3A1L190 88 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 AURKAO14965 403 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 KIF1CO43896 1103 aaKnown RBP7.06□□□□□ -1.28
UBE4B-208ENST00000475795 KCNJ13O60928 360 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 PMPCBO75439 489 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 SPAG6O75602 509 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 RECKO95980 971 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 MT-ND3P03897 115 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 KRT1P04264 644 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 FURINP09958 794 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 VCLP18206 1134 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 NELFEP18615 380 aaKnown RBP7.06□□□□□ -1.28
UBE4B-208ENST00000475795 PTPN3P26045 913 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 HMGCLP35914 325 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 ARHGAP25P42331 645 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 DRG2P55039 364 aaKnown RBP7.06□□□□□ -1.28
UBE4B-208ENST00000475795 DMPKQ09013 629 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 TMEM115Q12893 351 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-208ENST00000475795 DNASE1L3Q13609 305 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 GTF2H3Q13889 308 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 ERV3-1Q14264 604 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBE4B-208ENST00000475795 ATP13A5Q4VNC0 1218 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 TEX44Q53QW1 395 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 LRRC38Q5VT99 294 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 CCDC70Q6NSX1 233 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 TCTN3Q6NUS6 607 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 IRGCQ6NXR0 463 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 CYB5D1Q6P9G0 228 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 FAM92BQ6ZTR7 304 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 PPP1R3BQ86XI6 285 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 RFX6Q8HWS3 928 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 TRAPPC5Q8IUR0 188 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 SLC35G2Q8TBE7 412 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 DTX3LQ8TDB6 740 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 BRSK1Q8TDC3 778 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 MIB2Q96AX9 1013 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 RNF31Q96EP0 1072 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 ZDHHC12Q96GR4 267 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 ELMO2Q96JJ3 720 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 TEKT5Q96M29 485 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 DNAJC7Q99615 494 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 TRABDQ9H4I3 376 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 BPIFA1Q9NP55 256 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 IFNKQ9P0W0 207 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 SEMA5BQ9P283 1151 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 TRIM10Q9UDY6 481 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 LNPEPQ9UIQ6 1025 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 PLAAQ9Y263 795 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 WDR37Q9Y2I8 494 aa7.06□□□□□ -1.28
UBE4B-208ENST00000475795 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.06□□□□□ -1.282e-7■■■□□ 16.2
UBE4B-208ENST00000475795 USP9YO00507 2555 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-208ENST00000475795 USP9XQ93008 2570 aaPredicted RBP7.06□□□□□ -1.28
UBE4B-208ENST00000475795 IGHV5-51A0A0C4DH38 117 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 LOC285095A0A1B0GVY8 99 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 SSU72P8A0A1W2PR75 194 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 CDC14CA4D256 554 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 C21orf140B9A014 251 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 GOLGA6L19H0YKK7 550 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 MKRN2OSH3BPM6 223 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 J3QL48 77 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 K7EM74 188 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 KATNA1O75449 491 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 CREG1O75629 220 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 SNRNP200O75643 2136 aaKnown RBP7.05□□□□□ -1.28
UBE4B-208ENST00000475795 RFPL1O75677 317 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 TIAF1O95411 115 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 NR1D1P20393 614 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 VARSP26640 1264 aaKnown RBP7.05□□□□□ -1.28
UBE4B-208ENST00000475795 CD68P34810 354 aaPredicted RBP7.05□□□□□ -1.28
UBE4B-208ENST00000475795 SPAM1P38567 509 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 HALP42357 657 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 CD97P48960 835 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 CTSCP53634 463 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 PMS2P54278 862 aa7.05□□□□□ -1.28
UBE4B-208ENST00000475795 PPP1CAP62136 330 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms