RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 GSTM2P28161 218 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 AIF1P55008 147 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 ILF2Q12905 390 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 TUBA3CQ13748 450 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 FAM174BQ3ZCQ3 159 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 DENND5AQ6IQ26 1287 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 EFL1Q7Z2Z2 1120 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 SPATA19Q7Z5L4 167 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SPATA2LQ8IUW3 424 aaPredicted RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 COLGALT2Q8IYK4 626 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 TMEM199Q8N511 208 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 FAM86B1Q8N7N1 296 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SLC22A17Q8WUG5 538 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 C17orf50Q8WW18 174 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 PROX1Q92786 737 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 RPL3LQ92901 407 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 LINGO1Q96FE5 620 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 HMCESQ96FZ2 354 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 NSMCE3Q96MG7 304 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SLC2A13Q96QE2 648 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 CGREF1Q99674 301 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 RBM4BQ9BQ04 359 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 RBM4Q9BWF3 364 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 BBS2Q9BXC9 721 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 TUBB1Q9H4B7 451 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 GDAP2Q9NXN4 497 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 PKP3Q9Y446 797 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 IPPQ9Y573 584 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 PDE4DIPQ5VU43 2346 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 hCG_2039718K7EN88 272 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SLC1A7O00341 560 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 TFECO14948 347 aaPredicted RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 MAFKO60675 156 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 CYP7B1O75881 506 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 CD1DP15813 335 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 PSMD8P48556 350 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 ATP4BP51164 291 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 CLCNKBP51801 687 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 ARHGAP1Q07960 439 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 OR4L1Q8NH43 312 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 GPR152Q8TDT2 470 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 PTCD2Q8WV60 388 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 SLC10A4Q96EP9 437 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 MAGEE1Q9HCI5 957 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 LATS2Q9NRM7 1088 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 FAM8A1Q9UBU6 413 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 DERAQ9Y315 318 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 E9PAM4 449 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 PIRO00625 290 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SEC14L2O76054 403 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 LRATO95237 230 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 S1PR4O95977 384 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SERPINA1P01009 418 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 MYCLP1P12525 358 aaPredicted RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 CD36P16671 472 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 MSH3P20585 1137 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 AXLP30530 894 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 TGFBR1P36897 503 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 BRCC3P46736 316 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 LEPRP48357 1165 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 IDH2P48735 452 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 LHX1P48742 406 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SCNN1GP51170 649 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 DEFA1P59665 94 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 DEFA3P59666 94 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 EPS8Q12929 822 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 TOP3AQ13472 1001 aaPredicted RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 AAK1Q2M2I8 961 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SIRPB2Q5JXA9 342 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 UGT3A1Q6NUS8 523 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 PLEKHG7Q6ZR37 379 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 C14orf80Q86SX3 495 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SYVN1Q86TM6 617 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 ARMC8Q8IUR7 673 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SIDT2Q8NBJ9 832 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 CHDHQ8NE62 594 aaPredicted RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 HDAC2Q92769 488 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 ITPKCQ96DU7 683 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 TPD52L3Q96J77 140 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 PPP1R2P1Q96PQ5 205 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 NFKBIZQ9BYH8 718 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SLC25A51Q9H1U9 297 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 ATP13A3Q9H7F0 1226 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 TRIM39Q9HCM9 518 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 GIMAP4Q9NUV9 329 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 SCHIP1Q9P0W5 487 aaPredicted RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 DNAJB9Q9UBS3 223 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 GJD2Q9UKL4 321 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 UTS2RQ9UKP6 389 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 EIF3LQ9Y262 564 aaKnown RBP8.95□□□□□ -0.98
COPB1-202ENST00000439561 PCDHA9Q9Y5H5 950 aa8.95□□□□□ -0.98
COPB1-202ENST00000439561 ELOVL7A1L3X0 281 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 MEIS3P2A8K0S8 358 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 EFCAB9A8MZ26 197 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 SLC7A4O43246 635 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 TULP3O75386 442 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 GJB3O75712 270 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 CAPN15O75808 1086 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 THP07101 528 aa8.94□□□□□ -0.98
COPB1-202ENST00000439561 BMP4P12644 408 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms