RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 HMGB1P09429 215 aaKnown RBP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 ZNF883P0CG24 379 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 RNF224P0DH78 156 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 CDH1P12830 882 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 ITGAXP20702 1163 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 GPTP24298 496 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 CSTF2P33240 577 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 AARSP49588 968 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 HSPB2Q16082 182 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 CCDC38Q502W7 563 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 SPECC1Q5M775 1068 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 FAM83BQ5T0W9 1011 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 B3GNT6Q6ZMB0 384 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 NFE4Q86UQ8 179 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 MYPOPQ86VE0 399 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 SPEM1Q8N4L4 309 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 METTL27Q8N6F8 245 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 GJC3Q8NFK1 279 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 THAP4Q8WY91 577 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 SNAPC3Q92966 411 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 KXD1Q9BQD3 176 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 RBM4Q9BWF3 364 aaKnown RBP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 SAYSD1Q9NPB0 183 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 KLHL1Q9NR64 748 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 CISD1Q9NZ45 108 aaKnown RBP2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 TAAR2Q9P1P5 351 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 GRHPRQ9UBQ7 328 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 DERAQ9Y315 318 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 NFE2L3Q9Y4A8 694 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 PCDHGB5Q9Y5G0 923 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 MAPK8IP3Q9UPT6 1336 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 ANKRD30AQ9BXX3 1397 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 CD163L1Q9NR16 1453 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 LOC285556D6RIA3 1793 aa2.82□□□□□ -1.96
HMGB1P18-201ENST00000438801 MYO7AQ13402 2215 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 ZANQ9Y493 2812 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 IGKV3D-15A0A087WSY6 115 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 ARHGAP10A1A4S6 786 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 LILRA5A6NI73 299 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 TK1P04183 234 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 PRSS1P07477 247 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 RETP07949 1114 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 PCNAP12004 261 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 HLA-DOBP13765 273 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 PTPN2P17706 415 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 CD53P19397 219 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 CHATP28329 748 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 DCTP40126 519 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 FMO5P49326 533 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 BLKP51451 505 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 NR0B1P51843 470 aaKnown RBP2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 NR1H2P55055 460 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 PMP22Q01453 160 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 RUNX1T1Q06455 604 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 NEDD9Q14511 834 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 TMEM30BQ3MIR4 351 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 CTXN3Q4LDR2 81 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 TCEAL5Q5H9L2 206 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 MAP3K21Q5TCX8 1036 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 JMJD6Q6NYC1 403 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 KRBA2Q6ZNG9 492 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 MOB3CQ70IA8 216 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 TBC1D26Q86UD7 250 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 MYLK4Q86YV6 388 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 KRTAP7-1Q8IUC3 87 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 ODF3L1Q8IXM7 274 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 CPXM2Q8N436 756 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 TAS1R2Q8TE23 839 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 SH3KBP1Q96B97 665 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 ZC3HAV1LQ96H79 300 aaKnown RBP2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 BARHL1Q9BZE3 327 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 LMAN2LQ9H0V9 348 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 CSTL1Q9H114 145 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 SLC32A1Q9H598 525 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 C17orf75Q9HAS0 396 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 MYOZ2Q9NPC6 264 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 SUFUQ9UMX1 484 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 A3GALT2U3KPV4 340 aa2.81□□□□□ -1.96
HMGB1P18-201ENST00000438801 NFAT5O94916 1531 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 NUP155O75694 1391 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 SOS1Q07889 1333 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 PDS5AQ29RF7 1337 aaKnown RBP2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 RPGRIP1LQ68CZ1 1315 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 C17orf113A0A1B0GUU1 675 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 CLRN2A0PK11 232 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 PDHXO00330 501 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 CEP104O60308 925 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 CD58P19256 250 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 SP100P23497 879 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 ADD2P35612 726 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 HTR3AP46098 478 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 YWHAZP63104 245 aaKnown RBP2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 PITX1P78337 314 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 ITGADQ13349 1161 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 MAP9Q49MG5 647 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 CLEC18BQ6UXF7 455 aa2.8□□□□□ -1.96
HMGB1P18-201ENST00000438801 TMEM219Q86XT9 240 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms