RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 PTGFRNQ9P2B2 879 aa4.68□□□□□ -1.66
LINC00400-201ENST00000425609 DDX25Q9UHL0 483 aaKnown RBP4.68□□□□□ -1.66
LINC00400-201ENST00000425609 FBXL2Q9UKC9 423 aa4.68□□□□□ -1.66
LINC00400-201ENST00000425609 INSL5Q9Y5Q6 135 aa4.68□□□□□ -1.66
LINC00400-201ENST00000425609 FRMPD1Q5SYB0 1578 aa4.68□□□□□ -1.66
LINC00400-201ENST00000425609 MYO5CQ9NQX4 1742 aa4.68□□□□□ -1.66
LINC00400-201ENST00000425609 ATXN2Q99700 1313 aaKnown RBP4.68□□□□□ -1.66
LINC00400-201ENST00000425609 ARHGAP35Q9NRY4 1499 aa4.68□□□□□ -1.66
LINC00400-201ENST00000425609 MLH3Q9UHC1 1453 aa4.68□□□□□ -1.66
LINC00400-201ENST00000425609 MADDQ8WXG6 1647 aa4.68□□□□□ -1.66
LINC00400-201ENST00000425609 CDK13Q14004 1512 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 TTC37Q6PGP7 1564 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 CASKIN1Q8WXD9 1431 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 CNTLNQ9NXG0 1405 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 YEATS2Q9ULM3 1422 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 FEZF1A0PJY2 475 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 GOLGA6L9A6NEM1 432 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 H0Y626 953 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 HS3ST1O14792 307 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 SLC7A4O43246 635 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 PRAMEF11O60813 436 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 CELF2O95319 508 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 PSG1P11464 419 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 GJA1P17302 382 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 KCNA5P22460 613 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 NPY4RP50391 375 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 CLCNKAP51800 687 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 HNRNPKP61978 463 aaKnown RBP eCLIP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 ETFDHQ16134 617 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 KCNT1Q5JUK3 1230 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 C6orf163Q5TEZ5 329 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 PXDC1Q5TGL8 231 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 KRTAP5-3Q6L8H2 238 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 COLCA1Q6ZS62 124 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 ERN2Q76MJ5 926 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 CENPVQ7Z7K6 275 aaPredicted RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 GCSAMQ8N6F7 178 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 OR5R1Q8NH85 324 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 DENND1AQ8TEH3 1009 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 SECISBP2LQ93073 1101 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 ATP6V1E2Q96A05 226 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 SPACA9Q96E40 222 aaPredicted RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 JAKMIP1Q96N16 626 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 SMC6Q96SB8 1091 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 PCYT2Q99447 389 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 OLFM1Q99784 485 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 SEMA3CQ99985 751 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 NUP85Q9BW27 656 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 NOL11Q9H8H0 719 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 CNOT10Q9H9A5 744 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 GRPEL1Q9HAV7 217 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 EQTNQ9NQ60 294 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 MBNL1Q9NR56 388 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 GTF3C4Q9UKN8 822 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 LOXL2Q9Y4K0 774 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 LIPGQ9Y5X9 500 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 PTGDR2Q9Y5Y4 395 aa4.67□□□□□ -1.66
LINC00400-201ENST00000425609 SPAG9O60271 1321 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 RIMS1Q86UR5 1692 aaKnown RBP4.67□□□□□ -1.66
LINC00400-201ENST00000425609 UHRF1BP1Q6BDS2 1440 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 hDV102S1A0JD36 115 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 CCDC188H7C350 402 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 TMEM189-UBE2V1I3L0A0 370 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 SOCS2O14508 198 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 TOMM40O96008 361 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 LINGO3P0C6S8 592 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 TMEM191BP0C7N4 346 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 VDRP11473 427 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 FDPSP14324 419 aaKnown RBP4.66□□□□□ -1.66
LINC00400-201ENST00000425609 PFKFB1P16118 471 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 ERCC2P18074 760 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 C21orf33P30042 268 aaPredicted RBP4.66□□□□□ -1.66
LINC00400-201ENST00000425609 MATR3P43243 847 aaKnown RBP eCLIP4.66□□□□□ -1.66
LINC00400-201ENST00000425609 TNNT3P45378 269 aaPredicted RBP4.66□□□□□ -1.66
LINC00400-201ENST00000425609 HMGA2P52926 109 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 POLGP54098 1239 aaPredicted RBP4.66□□□□□ -1.66
LINC00400-201ENST00000425609 HSPA2P54652 639 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 Q0VFX4 171 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 UBE2V1Q13404 147 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 MELKQ14680 651 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 TNIP1Q15025 636 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 OASLQ15646 514 aaKnown RBP4.66□□□□□ -1.66
LINC00400-201ENST00000425609 ZDHHC20Q5W0Z9 365 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 WDR73Q6P4I2 378 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 METTL23Q86XA0 190 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 PRR26Q8N8Z3 221 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 CAMKVQ8NCB2 501 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 THAP6Q8TBB0 222 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 DEPDC1BQ8WUY9 529 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 SLC44A1Q8WWI5 657 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 ERLEC1Q96DZ1 483 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 MS4A10Q96PG2 267 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 CMKLR1Q99788 373 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 SLC25A33Q9BSK2 321 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 DCLK3Q9C098 648 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 TMPRSS5Q9H3S3 457 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 PCDH9Q9HC56 1237 aa4.66□□□□□ -1.66
LINC00400-201ENST00000425609 PIH1D3Q9NQM4 214 aaKnown RBP4.66□□□□□ -1.66
LINC00400-201ENST00000425609 CHCHD3Q9NX63 227 aaKnown RBP4.66□□□□□ -1.66
LINC00400-201ENST00000425609 RCC2Q9P258 522 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms