RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 SLC29A2Q14542 456 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 ELOCQ15369 112 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 SHBQ15464 509 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 CTSL3PQ5NE16 218 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 UHMK1Q8TAS1 419 aaKnown RBP17.27■□□□□ 0.35
LINC00271-201ENST00000421378 LINC00615Q96LM1 132 aaPredicted RBP17.27■□□□□ 0.35
LINC00271-201ENST00000421378 CPNE1Q99829 537 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 TIMM29Q9BSF4 260 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 TSSK1BQ9BXA7 367 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 EPB41L4BQ9H329 900 aa17.27■□□□□ 0.35
LINC00271-201ENST00000421378 TDRD6O60522 2096 aaKnown RBP17.26■□□□□ 0.35
LINC00271-201ENST00000421378 PIKFYVEQ9Y2I7 2098 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 H3BMM5 538 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 AQP9O43315 295 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 POP7O75817 140 aaKnown RBP17.26■□□□□ 0.35
LINC00271-201ENST00000421378 VCLP18206 1134 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 PBLDP30039 288 aaPredicted RBP17.26■□□□□ 0.35
LINC00271-201ENST00000421378 CTBSQ01459 385 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 KLHL38Q2WGJ6 581 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 AASDHQ4L235 1098 aaPredicted RBP17.26■□□□□ 0.35
LINC00271-201ENST00000421378 AMZ2Q86W34 360 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 FSTL5Q8N475 847 aaPredicted RBP17.26■□□□□ 0.35
LINC00271-201ENST00000421378 CCL4L1Q8NHW4 92 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 LMX1AQ8TE12 382 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 GSDMCQ9BYG8 508 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 RXFP3Q9NSD7 469 aa17.26■□□□□ 0.35
LINC00271-201ENST00000421378 DNMT3AQ9Y6K1 912 aaPredicted RBP17.26■□□□□ 0.35
LINC00271-201ENST00000421378 ZFHX2Q9C0A1 2572 aaPredicted RBP17.25■□□□□ 0.35
LINC00271-201ENST00000421378 CCDC151A5D8V7 595 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 KLHL33A6NCF5 533 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 ERLIN1O75477 346 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 CELA2BP08218 269 aaPredicted RBP17.25■□□□□ 0.35
LINC00271-201ENST00000421378 PKMP14618 531 aaKnown RBP17.25■□□□□ 0.35
LINC00271-201ENST00000421378 DGKAP23743 735 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 GP5P40197 560 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 ABCG1P45844 678 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 C1orf61Q13536 156 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 BRD3Q15059 726 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 ZC3HC1Q86WB0 502 aaKnown RBP17.25■□□□□ 0.35
LINC00271-201ENST00000421378 OR2L2Q8NH16 312 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 GPBAR1Q8TDU6 330 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 ATXN7L3BQ96GX2 97 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 PANX3Q96QZ0 392 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 CCM2Q9BSQ5 444 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 KLC4Q9NSK0 619 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 DNAAF2Q9NVR5 837 aaKnown RBP17.25■□□□□ 0.35
LINC00271-201ENST00000421378 UCKL1Q9NWZ5 548 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 SLC23A2Q9UGH3 650 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 CORO1CQ9ULV4 474 aaPredicted RBP17.25■□□□□ 0.35
LINC00271-201ENST00000421378 KCNK6Q9Y257 313 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 DNAJC16Q9Y2G8 782 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 PLEKHM1Q9Y4G2 1056 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 ST14Q9Y5Y6 855 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 COMMD10Q9Y6G5 202 aa17.25■□□□□ 0.35
LINC00271-201ENST00000421378 EP300Q09472 2414 aaPredicted RBP17.25■□□□□ 0.35
LINC00271-201ENST00000421378 EXOC1LA0A1B0GW35 172 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 MGAT4DA6NG13 374 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 IQCF5A8MTL0 148 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 E5RI56 91 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 TRIM16O95361 564 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 GSTM1P09488 218 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 ZNF883P0CG24 379 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 AK4P27144 223 aaPredicted RBP17.24■□□□□ 0.35
LINC00271-201ENST00000421378 HSD17B3P37058 310 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 ACTR1BP42025 376 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 CSE1LP55060 971 aaKnown RBP17.24■□□□□ 0.35
LINC00271-201ENST00000421378 ACTR1AP61163 376 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 GSTM4Q03013 218 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 BNIP3Q12983 259 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 UAP1Q16222 522 aaPredicted RBP17.24■□□□□ 0.35
LINC00271-201ENST00000421378 ZNF549Q6P9A3 640 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 SLC30A9Q6PML9 568 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 TAF8Q7Z7C8 310 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 GKN2Q86XP6 184 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 SDR16C5Q8N3Y7 309 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 SAP25Q8TEE9 199 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 MRRFQ96E11 262 aaKnown RBP17.24■□□□□ 0.35
LINC00271-201ENST00000421378 NDNQ99608 321 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 OSGEPL1Q9H4B0 414 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 RHOJQ9H4E5 214 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 TMEM9BQ9NQ34 198 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 GULP1Q9UBP9 304 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 FAM8A1Q9UBU6 413 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 DOLKQ9UPQ8 538 aa17.24■□□□□ 0.35
LINC00271-201ENST00000421378 C17orf113A0A1B0GUU1 675 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 NEMP2A6NFY4 417 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 LMO7DNF2Z398 122 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 CDX4O14627 284 aaPredicted RBP17.23■□□□□ 0.35
LINC00271-201ENST00000421378 PCDHGA12O60330 932 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 GFRA3O60609 400 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 KCNJ13O60928 360 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 NIPSNAP2O75323 286 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 ITGB6P18564 788 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 ARHGAP8P85298 464 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 DMPKQ09013 629 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 ILF2Q12905 390 aaKnown RBP17.23■□□□□ 0.35
LINC00271-201ENST00000421378 NFE2L1Q14494 772 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 NRROSQ86YC3 692 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 GATAD2AQ86YP4 633 aa17.23■□□□□ 0.35
LINC00271-201ENST00000421378 KRT222Q8N1A0 295 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms