RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KRT34O76011 436 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 SCAF4O95104 1147 aaKnown RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 PEX11BO96011 259 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 KRT6BP04259 564 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 S100A6P06703 90 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 ABHD2P08910 425 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 SBK3P0C264 359 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 UQCRFS1P1P0C7P4 283 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 ACP5P13686 325 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 ZNF8P17098 575 aaPredicted RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 ATP5JP18859 108 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 MYF6P23409 242 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 PTPN4P29074 926 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 ADORA1P30542 326 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 HOXA13P31271 388 aaPredicted RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 SFNP31947 248 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 CTNNB1P35222 781 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 PTGS2P35354 604 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 WNT5AP41221 380 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 KRT6CP48668 564 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 AP3M2P53677 418 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 CLRN1P58418 232 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 UBE2HP62256 183 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 GSTO1P78417 241 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 SP2Q02086 613 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 TAP2Q03519 686 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 GFPT1Q06210 699 aaPredicted RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 CCDC173Q0VFZ6 552 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 CSTF3Q12996 717 aaKnown RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 TUBA3CQ13748 450 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 CNGA3Q16281 694 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 ERCC6LQ2NKX8 1250 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 DPCR1Q3MIW9 517 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 PABPC1LQ4VXU2 614 aaKnown RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 ZNF569Q5MCW4 686 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 SFMBT2Q5VUG0 894 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 KRT79Q5XKE5 535 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 TUBA3EQ6PEY2 450 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 Q6ZRM9 215 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 TRAPPC11Q7Z392 1133 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 KCTD20Q7Z5Y7 419 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 SYVN1Q86TM6 617 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 IQCHQ86VS3 1027 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 AMZ2Q86W34 360 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 GAS2L3Q86XJ1 694 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 ITPRIPQ8IWB1 547 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 EIF1ADQ8N9N8 165 aaKnown RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 DBF4BQ8NFT6 615 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 OR52E1Q8NGJ3 308 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 OR2T34Q8NGX1 318 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 OR8K5Q8NH50 307 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 LILRB4Q8NHJ6 448 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 LRRC8CQ8TDW0 803 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 CASKIN2Q8WXE0 1202 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 RNFT2Q96EX2 444 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 MCRS1Q96EZ8 462 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 ABHD8Q96I13 439 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 KLHL15Q96M94 604 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 HS6ST2Q96MM7 605 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 NUDCD1Q96RS6 583 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 CLSTN3Q9BQT9 956 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 RIOK1Q9BRS2 568 aaKnown RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 TLR10Q9BXR5 811 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 GPR88Q9GZN0 384 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 TMEM39BQ9GZU3 492 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 THAP2Q9H0W7 228 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 GLT8D2Q9H1C3 349 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 CCDC134Q9H6E4 229 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 TUFT1Q9NNX1 390 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 PALMDQ9NP74 551 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 FAM212BQ9NTI7 297 aaPredicted RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 DNAJC17Q9NVM6 304 aaKnown RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 FBXO34Q9NWN3 711 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 DNMT3BQ9UBC3 853 aaKnown RBP4.57□□□□□ -1.68
CD44-202ENST00000278385 TRPS1Q9UHF7 1281 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 BAIAP2L1Q9UHR4 511 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 MKLN1Q9UL63 735 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 SORCS3Q9UPU3 1222 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 TNNQ9UQP3 1299 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 SSX2IPQ9Y2D8 614 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 U3KQV3 271 aa4.57□□□□□ -1.68
CD44-202ENST00000278385 GAKO14976 1311 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 ACOD1A6NK06 481 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 KRTAP9-7A8MTY7 169 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 DIRC3C9JPN6 131 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 QSOX1O00391 747 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 TRIM24O15164 1050 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 LIASO43766 372 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 AVILO75366 819 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 MTX2O75431 263 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 STC2O76061 302 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 POMCP01189 267 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 FAM58BPP0C7Q3 252 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 THRBP10828 461 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 PCNAP12004 261 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 CD19P15391 556 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 TNFRSF1AP19438 455 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 MAKP20794 623 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 FPR1P21462 350 aa4.56□□□□□ -1.68
CD44-202ENST00000278385 NR2F2P24468 414 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms