RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 CPSF4O95639 269 aaKnown RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 FABP3P05413 133 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 ADORA2AP29274 412 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 HTR7P34969 479 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 HNMTP50135 292 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF143P52747 638 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 EFNA5P52803 228 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 SMARCB1Q12824 385 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 KCNJ11Q14654 390 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 KCNA10Q16322 511 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 PLA2G4FQ68DD2 849 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 SWSAP1Q6NVH7 229 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 ZC3H3Q8IXZ2 948 aaKnown RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 LILRB1Q8NHL6 650 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 GRIN3AQ8TCU5 1115 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 CHIAQ9BZP6 476 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 MMP28Q9H239 520 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF334Q9HCZ1 680 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 PKP3Q9Y446 797 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 BTN3A1O00481 513 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 DDCP20711 480 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 HUNKP57058 714 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 MXD4Q14582 209 aaPredicted RBP12.75□□□□□ -0.37
VAMP4-201ENST00000236192 METTL6Q8TCB7 284 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 FICDQ9BVA6 458 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 PCDHA2Q9Y5H9 948 aa12.75□□□□□ -0.37
VAMP4-201ENST00000236192 RASGRP1O95267 797 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 CTRB1P17538 263 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 S100A3P33764 101 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 BCL7AQ4VC05 210 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 CTRB2Q6GPI1 263 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 LGI2Q8N0V4 545 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 TCEAL4Q96EI5 215 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF670Q9BS34 389 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 IL1RAPQ9NPH3 570 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 GPRC5CQ9NQ84 441 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 UBP1Q9NZI7 540 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 COMMD3Q9UBI1 195 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 MALT1Q9UDY8 824 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 NWD1Q149M9 1564 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 RP2O75695 350 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 UNGP13051 313 aaPredicted RBP12.74□□□□□ -0.37
VAMP4-201ENST00000236192 PFKFB4Q16877 469 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 NDUFAF6Q330K2 333 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 LIN54Q6MZP7 749 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 ZC3HC1Q86WB0 502 aaKnown RBP12.74□□□□□ -0.37
VAMP4-201ENST00000236192 CELF2-AS1Q8N7Q2 184 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 YIPF7Q8N8F6 280 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 SLAIN1Q8ND83 568 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 CNIH3Q8TBE1 160 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 TWIST2Q8WVJ9 160 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 MUL1Q969V5 352 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 NXPE2Q96DL1 559 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 MYRFLQ96LU7 910 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 PELOQ9BRX2 385 aaKnown RBP12.74□□□□□ -0.37
VAMP4-201ENST00000236192 C2orf40Q9H1Z8 148 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 NDFIP2Q9NV92 336 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 SNX6Q9UNH7 406 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 TMEM2Q9UHN6 1383 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 DISC1C4P0D8 188 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 WWP2O00308 870 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 RGS14O43566 566 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 LTFP02788 710 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 MT-ND2P03891 347 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 RAB3BP20337 219 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 SLC6A4P31645 630 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 TSPAN5P62079 268 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 TARDBPQ13148 414 aaKnown RBP eCLIP12.74□□□□□ -0.37
VAMP4-201ENST00000236192 KCNAB2Q13303 367 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 ZMYND11Q15326 602 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 COL28A1Q2UY09 1125 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 USP41Q3LFD5 358 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 PCID2Q5JVF3 399 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 IL27RAQ6UWB1 636 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 GPRASP2Q96D09 838 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 TSNAXQ99598 290 aaKnown RBP12.74□□□□□ -0.37
VAMP4-201ENST00000236192 TTLL2Q9BWV7 592 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 PIGUQ9H490 435 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 NIPAL2Q9H841 368 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 SP110Q9HB58 689 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 DDX4Q9NQI0 724 aaKnown RBP12.74□□□□□ -0.37
VAMP4-201ENST00000236192 ABCB8Q9NUT2 735 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 ZNF358Q9NW07 568 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 KRBOX1C9JBD0 128 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 INPPL1O15357 1258 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 DNASE1P24855 282 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 ERFEQ4G0M1 354 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 SCRN2Q96FV2 425 aa12.74□□□□□ -0.37
VAMP4-201ENST00000236192 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.74□□□□□ -0.37
VAMP4-201ENST00000236192 ZBTB24O43167 697 aaPredicted RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 PMPCBO75439 489 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 WDPCPO95876 746 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 TGFB3P10600 412 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 SCNN1DP51172 638 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 TSTQ16762 297 aaKnown RBP12.73□□□□□ -0.37
VAMP4-201ENST00000236192 CDONQ4KMG0 1287 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 SPATC1Q76KD6 591 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 DET1Q7L5Y6 550 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 MXRA8Q9BRK3 442 aa12.73□□□□□ -0.37
VAMP4-201ENST00000236192 DHRS4Q9BTZ2 278 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms