RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 PlaaP27612 794 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ccr4P51680 360 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Matn1P51942 500 aaKnown RBP10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gpr149Q3UVY1 732 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Taar7fQ5QD08 358 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Taar7eQ5QD09 358 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Taar7bQ5QD11 358 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Sema5bQ60519 1093 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 EfsQ64355 560 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Fmo2Q8K2I3 535 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Marc1Q9CW42 340 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mfsd10Q9D2V8 456 aaKnown RBP10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dusp21Q9D9D8 189 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cyp2j13Q3UNV4 503 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Laptm4bQ91XQ6 227 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Lbx2Q9WUN8 195 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Slc25a14Q9Z2B2 325 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Psmd4O35226 376 aaKnown RBP10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Fkbp8O35465 402 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Naa11Q3UX61 218 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Sdhaf3Q8BQU3 125 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cpxm2Q9D2L5 764 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cldn22Q9D7U6 220 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Nacc2Q9DCM7 586 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Lamb1P02469 1786 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 CroccQ8CJ40 2009 aa10.36□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Bhlhb9Q6PB60 539 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ube2r2Q6ZWZ2 238 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dennd1cQ8CFK6 786 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Aqp12Q8CHJ2 290 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dennd1aQ8K382 1016 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Acsm1Q91VA0 573 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dlg2Q91XM9 852 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Slc26a5Q99NH7 744 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dppa5aQ9CQS7 118 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cntnap5aQ0V8T9 1304 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Eif2b3B1AUN2 452 aaKnown RBP10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dcpp3L7N259 170 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Stxbp1O08599 594 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cer1O55233 272 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mup4P11590 178 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PtpraP18052 829 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PomkQ3TUA9 349 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 P4ha2Q60716 537 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Clcc1Q99LI2 539 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 CtsmQ9JL96 333 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Nectin3Q9JLB9 549 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Olfr49Q9Z1V0 313 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Slc6a21A0A1B0GSD2 748 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm17174M0QWQ9 212 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Kcnj12P52187 427 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Tbc1d24Q3UUG6 561 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Slc22a16Q497L8 649 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Dalrd3Q6PJN8 538 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Tll2Q9WVM6 1012 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 VirmaA2AIV2 1811 aaKnown RBP10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Otud4B2RRE7 1107 aaKnown RBP10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Pgam2O70250 253 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Pecam1Q08481 727 aaKnown RBP10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cd300lgQ1ERP8 331 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ccdc177Q3UHB8 706 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mfsd8Q8BH31 519 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Arl4dQ99PE9 201 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cldn9Q9Z0S7 217 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mrgpra2aA0A0R4J1Z0 331 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 MycP01108 439 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 GlrbP48168 496 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Trim40Q3UWA4 246 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Nt5dc1Q8C5P5 467 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Fnbp1lQ8K012 605 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Sash3Q8K352 380 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 9630041A04RikD3Z3U4 205 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cbx4O55187 551 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Srp54P14576 504 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ist1Q9CX00 362 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PlgrktQ9D3P8 147 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 LipaQ9Z0M5 397 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gm37596A0A0A6YXL2 336 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Cyp4a14O35728 507 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 LdlrP35951 862 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Lgals3bpQ07797 577 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Tmem65Q4VAE3 234 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Olfr1352Q8VGX5 309 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Tmem39aQ9CYC3 486 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Gabra4Q9D6F4 552 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 P01740 135 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Tmem184cQ3TPR7 525 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Obox3Q3UT54 335 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Bend6Q6PFX2 281 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Syt16Q7TN83 639 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Olfr784Q8VFZ9 319 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mrpl45Q9D0Q7 306 aaKnown RBP10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 PrnpP04925 254 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 1810065E05RikQ5NC41 235 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 DseQ8BLI4 958 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Ttyh1Q9D3A9 450 aa10.35□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mvb12bQ6KAU4 317 aa10.34□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Jazf1Q80ZQ5 243 aa10.34□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Mkl1Q8K4J6 964 aa10.34□□□□□ -0.75
Scn8a-201ENSMUST00000082209 Tdrd12Q9CWU0 1215 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms