RNA–Protein interactions for RNA: ENSMUST00000068378.5

Cntn1-202, Transcript of Contactin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cntn1, Length 3,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1-202ENSMUST00000068378 Pcdh17E9PXF0 1157 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Tsc22d2E9Q7M2 769 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Olfr172E9Q8F6 309 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Gm3327F7C9A1 213 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Gm8011K7N6Y5 207 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Gm8104K7N744 198 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 ClockO08785 855 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Dusp8O09112 663 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Bnip3O55003 187 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Nmt2O70311 529 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Syn1O88935 706 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Nr3c1P06537 783 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Meox2P32443 303 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 ItgavP43406 1044 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 PtgdrP70263 357 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Lypla1P97823 230 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Prss55Q14BX2 321 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Fam183bQ5NC57 135 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Snrnp70Q62376 448 aaKnown RBP7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Wdr59Q8C0M0 992 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Sfrp1Q8C4U3 314 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ccdc142Q8CAI1 738 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Odf4Q8VI88 290 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Rgs18Q99PG4 235 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Tchhl1Q9D3P1 638 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Cldn22Q9D7U6 220 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Cntd1Q9D995 334 aa7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Mecp2Q9Z2D6 484 aaKnown RBP7.12□□□□□ -1.27
Cntn1-202ENSMUST00000068378 A0A1Y7VML8 143 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Gm30302A0A1Y7VN40 1110 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 TagapB2RWW0 714 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Gm20503G3UZK1 150 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Cyp21P03940 487 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Cyp2d9P11714 504 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Kcnc1P15388 511 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Gria1P23818 907 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ptpn11P35235 597 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 TtkP35761 856 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 St3gal1P54751 337 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Nkx3-2P97503 333 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Q3TYS2 187 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Frmd8Q3UFK8 466 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Bhlha9Q5RJB0 231 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Sox17Q61473 419 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Eif2b4Q61749 524 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Fkbp3Q62446 224 aaKnown RBP7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Doxl2Q6IMK7 723 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Zadh2Q8BGC4 377 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Adgrg7Q8BM96 785 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Clec9aQ8BRU4 238 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 PxkQ8BX57 582 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Q8CCC3 530 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 C1sbQ8CFG8 688 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 C1saQ8CG14 688 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Acaa1bQ8VCH0 424 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Psmd9Q9CR00 222 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ilf2Q9CXY6 390 aaKnown RBP7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Mgrn1Q9D074 532 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Uqcrc2Q9DB77 453 aaKnown RBP7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Hmgn3Q9DCB1 99 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Il23aQ9EQ14 196 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ubqln2Q9QZM0 638 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Lypla2Q9WTL7 231 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Col15a1O35206 1367 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Btnl6A2CG22 539 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Vmn2r58K7N6V2 862 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Serpinb9O08797 374 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 AfmO89020 608 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Camk2aP11798 478 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Il1rnP25085 178 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ccnd2P30280 289 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Mmp12P34960 473 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Fbxo40P62932 710 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Dlg3P70175 849 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Npas2P97460 816 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Atp13a5Q3TYU2 1216 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ttbk2Q3UVR3 1243 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Olfr17Q7TRM9 315 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Mrps7Q80X85 242 aaKnown RBP7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Atp2c1Q80XR2 918 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Atpaf1Q811I0 324 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 GmdsQ8K0C9 372 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ddx52Q8K301 598 aaKnown RBP7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ccdc59Q8R2N0 240 aaKnown RBP7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Sorcs3Q8VI51 1219 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Emid1Q91VF5 444 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 NrarpQ91ZA8 114 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Coro6Q920M5 471 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Nrif2Q921B4 824 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Chmp1b1Q99LU0 199 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Cotl1Q9CQI6 142 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Bcl7aQ9CXE2 210 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Echdc3Q9D7J9 300 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Olfr704Q9EPF6 315 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Uchl3Q9JKB1 230 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Crim1Q9JLL0 1037 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Lbx2Q9WUN8 195 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Gm28710A0A1B0GR31 962 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Gm16368A0A1Y7VNG9 144 aa7.11□□□□□ -1.27
Cntn1-202ENSMUST00000068378 Ppt2O35448 302 aa7.11□□□□□ -1.27
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms