RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 NEMP2A6NFY4 417 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 MGAT4DA6NG13 374 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CDX4O14627 284 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-216ENST00000623185 RIPK2O43353 540 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 PCDHGA12O60330 932 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 PIAS2O75928 621 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CD9P21926 228 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 DGKAP23743 735 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 GABRB3P28472 473 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 SLC1A2P43004 574 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 GNPDA1P46926 289 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 PRLHRP49683 370 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CTSCP53634 463 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 ATXN3P54252 364 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-216ENST00000623185 SLC14A1Q13336 389 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 SLC29A2Q14542 456 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 SUZ12Q15022 739 aaKnown RBP12.28□□□□□ -0.44
LINC00963-216ENST00000623185 BRD3Q15059 726 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 ELOCQ15369 112 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 SHBQ15464 509 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 KBTBD12Q3ZCT8 623 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 MAP9Q49MG5 647 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 ZNF542PQ5EBM4 170 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 KCTD16Q68DU8 428 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CAPN12Q6ZSI9 719 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 MICALCLQ6ZW33 695 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 MARK2Q7KZI7 788 aaKnown RBP12.28□□□□□ -0.44
LINC00963-216ENST00000623185 ASCL5Q7RTU5 278 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 C11orf96Q7Z7L8 435 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 AMZ2Q86W34 360 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 GALNT13Q8IUC8 556 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CNPY4Q8N129 248 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 DCLK2Q8N568 766 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 OR2M4Q96R27 311 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CPNE1Q99829 537 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 TIMM29Q9BSF4 260 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CCM2Q9BSQ5 444 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 MCMBPQ9BTE3 642 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 TMEM168Q9H0V1 697 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 SMOC1Q9H4F8 434 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 ACSS3Q9H6R3 686 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 SMYD2Q9NRG4 433 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CORO1CQ9ULV4 474 aaPredicted RBP12.28□□□□□ -0.44
LINC00963-216ENST00000623185 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 GPSM3Q9Y4H4 160 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 PCDHGB2Q9Y5G2 931 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 PRSS21Q9Y6M0 314 aa12.28□□□□□ -0.44
LINC00963-216ENST00000623185 SPAG17Q6Q759 2223 aa12.27□□□□□ -0.44
LINC00963-216ENST00000623185 OR2AG2A6NM03 316 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 CXorf49A8MYA2 514 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 TPP1O14773 563 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 SCAMP1O15126 338 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 KPNA5O15131 536 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 ACSL3O95573 720 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 FTH1P02794 183 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 PKMP14618 531 aaKnown RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 VCLP18206 1134 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 FMO4P31512 558 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 ARHGAP8P85298 464 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 CTBSQ01459 385 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 PLOD1Q02809 727 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 DMPKQ09013 629 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 BNIP3Q12983 259 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 SF3A2Q15428 464 aaKnown RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 PRRT3Q5FWE3 981 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 ZNF789Q5FWF6 425 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 GRTP1Q5TC63 336 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 PTRHD1Q6GMV3 140 aaKnown RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 TCEAL6Q6IPX3 200 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 CNSTQ6PJW8 725 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 PRR23CQ6ZRP0 262 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 DET1Q7L5Y6 550 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 CHST15Q7LFX5 561 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 STRA8Q7Z7C7 330 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 TRAPPC5Q8IUR0 188 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 GSPT2Q8IYD1 628 aaKnown RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 SLC25A45Q8N413 288 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 MINDY1Q8N5J2 469 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 OR2L2Q8NH16 312 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 SAP25Q8TEE9 199 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 HNRNPLLQ8WVV9 542 aaKnown RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 TCEAL3Q969E4 200 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 PDXPQ96GD0 296 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 PANX3Q96QZ0 392 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 CCDC77Q9BR77 488 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 GTPBP2Q9BX10 602 aaKnown RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 TSSK1BQ9BXA7 367 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 GSDMCQ9BYG8 508 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 TCEAL2Q9H3H9 227 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 PARD6AQ9NPB6 346 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 FSCN3Q9NQT6 498 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 FBXO6Q9NRD1 293 aaPredicted RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 TM7SF3Q9NS93 570 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 TXNDC16Q9P2K2 825 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 KLHL42Q9P2K6 505 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 SLC23A2Q9UGH3 650 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 FETUBQ9UGM5 382 aa12.27□□□□□ -0.45
LINC00963-216ENST00000623185 APOBEC3BQ9UH17 382 aaKnown RBP12.27□□□□□ -0.45
LINC00963-216ENST00000623185 RAPGEFL1Q9UHV5 662 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms