RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 KIAA0754O94854 1291 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 NDUFA10O95299 355 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 PTPN3P26045 913 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 FOXK1P85037 733 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 GTF2H3Q13889 308 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 CACHD1Q5VU97 1274 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 TRAPPC5Q8IUR0 188 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 GALNT6Q8NCL4 622 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 GDAP1Q8TB36 358 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 KLHL6Q8WZ60 621 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 STAMBPL1Q96FJ0 436 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 ZDHHC12Q96GR4 267 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 ELMO2Q96JJ3 720 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 TEKT5Q96M29 485 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 ZNHIT6Q9NWK9 470 aaKnown RBP17.09■□□□□ 0.33
CRTC3-208ENST00000560098 UBP1Q9NZI7 540 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 TRIM10Q9UDY6 481 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 EPHA6Q9UF33 1036 aa17.09■□□□□ 0.33
CRTC3-208ENST00000560098 RELNP78509 3460 aa17.08■□□□□ 0.33
CRTC3-208ENST00000560098 FGF5P12034 268 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 HMGCLP35914 325 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 HALP42357 657 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 NR2C2P49116 596 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 IGFBP7Q16270 282 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 LACTB2Q53H82 288 aaPredicted RBP17.08■□□□□ 0.32
CRTC3-208ENST00000560098 IRGCQ6NXR0 463 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 FAM92BQ6ZTR7 304 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 RHOT2Q8IXI1 618 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 BRSK1Q8TDC3 778 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 TTC25Q96NG3 672 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 RAB33BQ9H082 229 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 TRABDQ9H4I3 376 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 DDX56Q9NY93 547 aaKnown RBP17.08■□□□□ 0.32
CRTC3-208ENST00000560098 WDR37Q9Y2I8 494 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 KCNMB2Q9Y691 235 aa17.08■□□□□ 0.32
CRTC3-208ENST00000560098 PTPN13Q12923 2485 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 KCNJ13O60928 360 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 SPAG6O75602 509 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 CCNYL3P0C7X3 344 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 SLC1A1P43005 524 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 SRSF1Q07955 248 aaKnown RBP eCLIP17.07■□□□□ 0.32
CRTC3-208ENST00000560098 TRIM14Q14142 442 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 PRKD1Q15139 912 aaPredicted RBP17.07■□□□□ 0.32
CRTC3-208ENST00000560098 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.07■□□□□ 0.32
CRTC3-208ENST00000560098 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 MFSD7Q6UXD7 560 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 BZW1Q7L1Q6 419 aaKnown RBP17.07■□□□□ 0.32
CRTC3-208ENST00000560098 PPP1R3BQ86XI6 285 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 RHOT1Q8IXI2 618 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 IL26Q9NPH9 171 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 FAM153AQ9UHL3 310 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 LNPEPQ9UIQ6 1025 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 KCND3Q9UK17 655 aa17.07■□□□□ 0.32
CRTC3-208ENST00000560098 LOC285095A0A1B0GVY8 99 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 KATNA1O75449 491 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 EPOP01588 193 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 TNNT1P13805 278 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 NELFEP18615 380 aaKnown RBP17.06■□□□□ 0.32
CRTC3-208ENST00000560098 CD68P34810 354 aaPredicted RBP17.06■□□□□ 0.32
CRTC3-208ENST00000560098 WNT3AP56704 352 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 ERV3-1Q14264 604 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 NOMO1Q15155 1222 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 ZDHHC20Q5W0Z9 365 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 AMZ2Q86W34 360 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 DTX3LQ8TDB6 740 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 TFB1MQ8WVM0 346 aaKnown RBP17.06■□□□□ 0.32
CRTC3-208ENST00000560098 CHP1Q99653 195 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 SPTLC3Q9NUV7 552 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 SAE1Q9UBE0 346 aaPredicted RBP17.06■□□□□ 0.32
CRTC3-208ENST00000560098 POLHQ9Y253 713 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 TP53TG5Q9Y2B4 290 aa17.06■□□□□ 0.32
CRTC3-208ENST00000560098 SPENQ96T58 3664 aaKnown RBP17.06■□□□□ 0.32
CRTC3-208ENST00000560098 POP7O75817 140 aaKnown RBP17.05■□□□□ 0.32
CRTC3-208ENST00000560098 MT-ND3P03897 115 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 FURINP09958 794 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 NFKB1P19838 968 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 FECHP22830 423 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 SPAM1P38567 509 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 TNNT3P45378 269 aaPredicted RBP17.05■□□□□ 0.32
CRTC3-208ENST00000560098 DMPKQ09013 629 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 WASHC5Q12768 1159 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 UBAP2LQ14157 1087 aaKnown RBP17.05■□□□□ 0.32
CRTC3-208ENST00000560098 TFDP2Q14188 446 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 SIRPB2Q5JXA9 342 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 KDELC1Q6UW63 502 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 TTC30BQ8N4P2 665 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 UBXN4Q92575 508 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 CCDC42Q96M95 316 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 ZCCHC2Q9C0B9 1178 aaKnown RBP17.05■□□□□ 0.32
CRTC3-208ENST00000560098 NHEJ1Q9H9Q4 299 aaPredicted RBP17.05■□□□□ 0.32
CRTC3-208ENST00000560098 PDE7BQ9NP56 450 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 ABHD10Q9NUJ1 306 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.05■□□□□ 0.32
CRTC3-208ENST00000560098 SEMA5BQ9P283 1151 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 PADI1Q9ULC6 663 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 HYOU1Q9Y4L1 999 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 PCDHGA6Q9Y5G7 932 aa17.05■□□□□ 0.32
CRTC3-208ENST00000560098 NAV2Q8IVL1 2488 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms