RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 C1QTNF1Q9BXJ1 281 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 CAAP1Q9H8G2 361 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 MID2Q9UJV3 735 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 CNOT6Q9ULM6 557 aaKnown RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 ACOT9Q9Y305 439 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 PCDHGA2Q9Y5H1 932 aa12.25□□□□□ -0.45
TPM1-209ENST00000558072 ATXN2Q99700 1313 aaKnown RBP12.25□□□□□ -0.45
TPM1-209ENST00000558072 GPR39O43194 453 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 NUAK1O60285 661 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 SOD1P00441 154 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 SP9P0CG40 484 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 FDXRP22570 491 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 DGKAP23743 735 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 HOXD12P35452 270 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 IGFALSP35858 605 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 PRLHRP49683 370 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 CDKN1CP49918 316 aaPredicted RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 SLC18A1P54219 525 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 PFN3P60673 137 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 LPAL2Q16609 132 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 FAM83EQ2M2I3 478 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 PLEKHS1Q5SXH7 462 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 AGAP9Q5VTM2 703 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 ZC3H14Q6PJT7 736 aaKnown RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 ADGRG6Q86SQ4 1221 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 LDB1Q86U70 411 aaPredicted RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 LRRTM4Q86VH4 590 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 PELI3Q8N2H9 469 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 BEND7Q8N7W2 519 aaPredicted RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 PNPLA1Q8N8W4 532 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 TMEM145Q8NBT3 493 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 PRSS33Q8NF86 280 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 ASZ1Q8WWH4 475 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 KLHDC7BQ96G42 594 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 WDR92Q96MX6 357 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 BIRC8Q96P09 236 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 CCM2Q9BSQ5 444 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 IRF2BPLQ9H1B7 796 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 CNOT10Q9H9A5 744 aaKnown RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 GPAMQ9HCL2 828 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 MBNL1Q9NR56 388 aaKnown RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 AASDHPPTQ9NRN7 309 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 SNX15Q9NRS6 342 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 MKS1Q9NXB0 559 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 GRID1Q9ULK0 1009 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 NOVA2Q9UNW9 492 aaKnown RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 MTO1Q9Y2Z2 717 aaKnown RBP12.24□□□□□ -0.45
TPM1-209ENST00000558072 DHRS7Q9Y394 339 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 R4GN57 208 aa12.24□□□□□ -0.45
TPM1-209ENST00000558072 CEP192Q8TEP8 1941 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 A0A096LPK6 155 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 COPEO14579 308 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 LIN7AO14910 233 aaPredicted RBP12.23□□□□□ -0.45
TPM1-209ENST00000558072 CHUKO15111 745 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 HRO43593 1189 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 OR1I1O60431 355 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 GLRA3O75311 464 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 KRT4P19013 534 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 SAT1P21673 171 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 CD38P28907 300 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 CA5AP35218 305 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 MAGEA12P43365 314 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 IL2P60568 153 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 ATP6V0D1P61421 351 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 RPA4Q13156 261 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 LRP8Q14114 963 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 TMEM220Q6QAJ8 160 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 LAYNQ6UX15 382 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 CEP68Q76N32 757 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 GALNT13Q8IUC8 556 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 TRAPPC5Q8IUR0 188 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
TPM1-209ENST00000558072 TMEFF1Q8IYR6 380 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 RGL4Q8IZJ4 473 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 PLA2G15Q8NCC3 412 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 OR56A4Q8NGH8 313 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 SREK1Q8WXA9 508 aaKnown RBP12.23□□□□□ -0.45
TPM1-209ENST00000558072 NELL1Q92832 810 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 FUBP1Q96AE4 644 aaKnown RBP12.23□□□□□ -0.45
TPM1-209ENST00000558072 TLCD1Q96CP7 247 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 ATXN7L3BQ96GX2 97 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 PDLIM5Q96HC4 596 aaKnown RBP12.23□□□□□ -0.45
TPM1-209ENST00000558072 HSPA12BQ96MM6 686 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 OR2AG1Q9H205 316 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 EBF2Q9HAK2 575 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 NMRAL1Q9HBL8 299 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 NKIRAS1Q9NYS0 192 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 SLC17A4Q9Y2C5 497 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 OAS3Q9Y6K5 1087 aaKnown RBP12.23□□□□□ -0.45
TPM1-209ENST00000558072 ZDBF2Q9HCK1 2354 aa12.23□□□□□ -0.45
TPM1-209ENST00000558072 TNRC6BQ9UPQ9 1833 aaKnown RBP12.23□□□□□ -0.45
TPM1-209ENST00000558072 A0A0C4DFX4 3053 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 PABPN1LA6NDY0 278 aaKnown RBP12.22□□□□□ -0.45
TPM1-209ENST00000558072 K7ESM1 405 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 TPP1O14773 563 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 RAD51BO15315 384 aa12.22□□□□□ -0.45
TPM1-209ENST00000558072 TM9SF1O15321 606 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms