RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 GSTM1P09488 218 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 FAM153BP0C7A2 387 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 VCLP18206 1134 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 RPS3P23396 243 aaKnown RBP eCLIP14.08□□□□□ -0.165e-7■□□□□ 10.4
CHD8-208ENST00000555301 LEPRP48357 1165 aaKnown RBP14.08□□□□□ -0.16
CHD8-208ENST00000555301 PRLHRP49683 370 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 CTSCP53634 463 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 PMS2P54278 862 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 GSTM4Q03013 218 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 ILF2Q12905 390 aaKnown RBP14.08□□□□□ -0.16
CHD8-208ENST00000555301 SLC14A1Q13336 389 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 SUZ12Q15022 739 aaKnown RBP14.08□□□□□ -0.16
CHD8-208ENST00000555301 SHBQ15464 509 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 FAM153CQ494X1 144 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 CRTC3Q6UUV7 619 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 CHST15Q7LFX5 561 aaPredicted RBP14.08□□□□□ -0.16
CHD8-208ENST00000555301 SLC26A11Q86WA9 606 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 ZNF547Q8IVP9 402 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 CLDN19Q8N6F1 224 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 PNPLA1Q8N8W4 532 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 LMX1AQ8TE12 382 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 FBF1Q8TES7 1133 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 LPGAT1Q92604 370 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 LINC00615Q96LM1 132 aaPredicted RBP14.08□□□□□ -0.16
CHD8-208ENST00000555301 TIMM29Q9BSF4 260 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 LRRC61Q9BV99 259 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 TSSK1BQ9BXA7 367 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 GSDMCQ9BYG8 508 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 TMEM168Q9H0V1 697 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 TCEAL2Q9H3H9 227 aaPredicted RBP14.08□□□□□ -0.16
CHD8-208ENST00000555301 GNPTGQ9UJJ9 305 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 RAB21Q9UL25 225 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 PCDHB1Q9Y5F3 818 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 PCDHGB2Q9Y5G2 931 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 CSNK1G3Q9Y6M4 447 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 SCN8AQ9UQD0 1980 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 GPR179Q6PRD1 2367 aa14.08□□□□□ -0.16
CHD8-208ENST00000555301 CEP192Q8TEP8 1941 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 SPAG17Q6Q759 2223 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 VPS13AQ96RL7 3174 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 FAM159BA6NKW6 160 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 H3BMM5 538 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 CDX4O14627 284 aaPredicted RBP14.07□□□□□ -0.16
CHD8-208ENST00000555301 SGTAO43765 313 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 SDC3O75056 442 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 POP7O75817 140 aaKnown RBP14.07□□□□□ -0.16
CHD8-208ENST00000555301 FTH1P02794 183 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 ESR1P03372 595 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 ACP5P13686 325 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 DGKAP23743 735 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 CTBSQ01459 385 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 BNIP3Q12983 259 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 NAB1Q13506 487 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 INSCQ1MX18 579 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 PTRHD1Q6GMV3 140 aaKnown RBP14.07□□□□□ -0.16
CHD8-208ENST00000555301 EMBQ6PCB8 327 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 AMZ2Q86W34 360 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 GKN2Q86XP6 184 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 ZNF548Q8NEK5 533 aaPredicted RBP14.07□□□□□ -0.16
CHD8-208ENST00000555301 OR2I1PQ8NGU4 316 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 GPBAR1Q8TDU6 330 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 SAP25Q8TEE9 199 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 CCDC97Q96F63 343 aaPredicted RBP14.07□□□□□ -0.16
CHD8-208ENST00000555301 FUT8Q9BYC5 575 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 TXLNGYQ9BZA5 131 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 P2RY12Q9H244 342 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 CCDC68Q9H2F9 335 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 FBXO6Q9NRD1 293 aaPredicted RBP14.07□□□□□ -0.16
CHD8-208ENST00000555301 TXNDC16Q9P2K2 825 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 DOLKQ9UPQ8 538 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 PRKAB1Q9Y478 270 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 PCYT1BQ9Y5K3 369 aaPredicted RBP14.07□□□□□ -0.16
CHD8-208ENST00000555301 COMMD10Q9Y6G5 202 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 PRSS21Q9Y6M0 314 aa14.07□□□□□ -0.16
CHD8-208ENST00000555301 ZNF106Q9H2Y7 1883 aaKnown RBP14.06□□□□□ -0.16
CHD8-208ENST00000555301 MYLKQ15746 1914 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 C17orf113A0A1B0GUU1 675 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 LMO7DNF2Z398 122 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 SCAMP1O15126 338 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 ACSL3O95573 720 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 ABHD2P08910 425 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 ALPPL2P10696 532 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 FMO4P31512 558 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 CD151P48509 253 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 CLCNKAP51800 687 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 EIF3BP55884 814 aaKnown RBP14.06□□□□□ -0.16
CHD8-208ENST00000555301 MPP1Q00013 466 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 IL9RQ01113 521 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 C1orf61Q13536 156 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 INAVAQ3KP66 663 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 LVRNQ6Q4G3 990 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 TAF8Q7Z7C8 310 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 C11orf96Q7Z7L8 435 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 OR2L2Q8NH16 312 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 BIRC8Q96P09 236 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 PANX3Q96QZ0 392 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 CYTH2Q99418 400 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 CCM2Q9BSQ5 444 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 RXFP3Q9NSD7 469 aa14.06□□□□□ -0.16
CHD8-208ENST00000555301 KLC4Q9NSK0 619 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms