RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 CCDC38Q502W7 563 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 ZRANB3Q5FWF4 1079 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 AARS2Q5JTZ9 985 aaKnown RBP13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 HES3Q5TGS1 186 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 METRNLQ641Q3 311 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 AFTPHQ6ULP2 937 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 ZNF572Q7Z3I7 529 aaPredicted RBP13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 CAND1Q86VP6 1230 aaKnown RBP13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 SERPINA9Q86WD7 417 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 MPP5Q8N3R9 675 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 OR2L2Q8NH16 312 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 OR4L1Q8NH43 312 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 HDAC10Q969S8 669 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 CCDC74AQ96AQ1 378 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 CAPZA3Q96KX2 299 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 ZNF778Q96MU6 729 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 DEPDC7Q96QD5 511 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 DPYSL5Q9BPU6 564 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 SUDS3Q9H7L9 328 aaPredicted RBP13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 VPS37BQ9H9H4 285 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 ACSL5Q9ULC5 683 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 SOX13Q9UN79 622 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 RNF215Q9Y6U7 377 aa13.55□□□□□ -0.24
TNFSF13B-206ENST00000542136 FAM237BA0A1B0GVD1 139 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 TCRBV7S3A2A0A539 114 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 TMEM8BA6NDV4 472 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 RHPN2P1A8MT19 583 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 GPR39O43194 453 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 SGTAO43765 313 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 TOP3BO95985 862 aaKnown RBP13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 PRLHRP49683 370 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 VPS41P49754 854 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 CTSCP53634 463 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 SESN2P58004 480 aaPredicted RBP13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 PRAMEP78395 509 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 GPLD1P80108 840 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 CBLBQ13191 982 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 TCEA2Q15560 299 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 CCDC157Q569K6 752 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 FNBP1LQ5T0N5 605 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 RNASEH2BQ5TBB1 312 aaKnown RBP13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 CRTC3Q6UUV7 619 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 SYT10Q6XYQ8 523 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 TAS2R42Q7RTR8 314 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 SPRED1Q7Z699 444 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 SLC9B2Q86UD5 537 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 CCNJLQ8IV13 435 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 RBM12BQ8IXT5 1001 aaKnown RBP13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 PIANPQ8IYJ0 282 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 ZFPM2Q8WW38 1151 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 GATA6Q92908 595 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 SGF29Q96ES7 293 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 NRSN2Q9GZP1 204 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 EPB41L1Q9H4G0 881 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 STN1Q9H668 368 aaKnown RBP13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 DKK4Q9UBT3 224 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 KCNK6Q9Y257 313 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 BPTFQ12830 3046 aa13.54□□□□□ -0.24
TNFSF13B-206ENST00000542136 MYLKQ15746 1914 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 OR2AG2A6NM03 316 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 KIF2AO00139 706 aaPredicted RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 CCL22O00626 93 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 DNALI1O14645 258 aaPredicted RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 PPM1DO15297 605 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 GOT2P00505 430 aaKnown RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 MGAT1P26572 445 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 TTPAP49638 278 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 EPHA4P54764 986 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 PLOD1Q02809 727 aaPredicted RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 TARDBPQ13148 414 aaKnown RBP eCLIP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 RPA4Q13156 261 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 TUBB2AQ13885 445 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 SPIDRQ14159 915 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 DBN1Q16643 649 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 FASTKD1Q53R41 847 aaKnown RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 ANKRD22Q5VYY1 191 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 RBM44Q6ZP01 1051 aaKnown RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 MAATS1Q7Z4T9 603 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 TMEM135Q86UB9 458 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 C17orf53Q8N3J3 647 aaPredicted RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 SPATA4Q8NEY3 305 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 GPR150Q8NGU9 434 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 OR6P1Q8NGX9 317 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 SLC37A2Q8TED4 501 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 SERPINB12Q96P63 405 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 GFM1Q96RP9 751 aaKnown RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 TCF12Q99081 682 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 CCM2Q9BSQ5 444 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 NAT9Q9BTE0 207 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 TUBB2BQ9BVA1 445 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 TMEM121BQ9BXQ6 578 aaPredicted RBP13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 LRRN3Q9H3W5 708 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 FAM96AQ9H5X1 160 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 PRDM8Q9NQV8 689 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 SAMD15Q9P1V8 674 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 SLC2A6Q9UGQ3 507 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 ASIC3Q9UHC3 531 aa13.53□□□□□ -0.24
TNFSF13B-206ENST00000542136 RABGEF1Q9UJ41 708 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms