RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 APOL1O14791 398 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 VEGFDO43915 354 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 PMPCBO75439 489 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 SPAG6O75602 509 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 TIAF1O95411 115 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 IDSP22304 550 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 DYNLT1P63172 113 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 TPM4P67936 248 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 KLRB1Q12918 225 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 PDK1Q15118 436 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 NOMO1Q15155 1222 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 PRSS42Q7Z5A4 293 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 TRAPPC5Q8IUR0 188 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 KLHL6Q8WZ60 621 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 IFNKQ9P0W0 207 aa18.09■□□□□ 0.49
SSSCA1-206ENST00000531405 CLEC18AA5D8T8 446 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 MTSS1O43312 755 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 NDST3O95803 873 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 FGF5P12034 268 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 TMEM115Q12893 351 aaPredicted RBP18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 KCNAB1Q14722 419 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 SLC18A3Q16572 532 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 AGAP9Q5VTM2 703 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 CLEC18BQ6UXF7 455 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 WASH2PQ6VEQ5 465 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 RFX6Q8HWS3 928 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 CLEC18CQ8NCF0 446 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 GPR150Q8NGU9 434 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 GDAP1Q8TB36 358 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 IQCDQ96DY2 449 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 ZDHHC12Q96GR4 267 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 VPS35Q96QK1 796 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 MAK16Q9BXY0 300 aaKnown RBP18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 TWSG1Q9GZX9 223 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 GLOD4Q9HC38 313 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 WASH6PQ9NQA3 447 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 POLHQ9Y253 713 aa18.08■□□□□ 0.48
SSSCA1-206ENST00000531405 IGHV5-51A0A0C4DH38 117 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 MKRN2OSH3BPM6 223 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 PPP1R12AO14974 1030 aaPredicted RBP18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 GPR39O43194 453 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 KRT1P04264 644 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 NELFEP18615 380 aaKnown RBP18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 MLLT10P55197 1068 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 DNASE1L3Q13609 305 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 PPP1R3BQ86XI6 285 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 SLC35G2Q8TBE7 412 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 CT55Q8WUE5 264 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 MIB2Q96AX9 1013 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 RNF25Q96BH1 459 aaPredicted RBP18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 RUFY1Q96T51 708 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 LCMT1Q9UIC8 334 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 TLK1Q9UKI8 766 aa18.07■□□□□ 0.48
SSSCA1-206ENST00000531405 SHANK1Q9Y566 2161 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 A0A0A6YYK5 440 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 PIPSLA2A3N6 862 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 GOLGA6L3A6NEY3 463 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 ZNF487B1APH4 448 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 F5H423 210 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 CREG1O75629 220 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 DNAJB5O75953 348 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 TMEM253P0C7T8 217 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 CCNYL3P0C7X3 344 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 TNNT1P13805 278 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 FOLR1P15328 257 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 PTPN3P26045 913 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 HNRNPH3P31942 346 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 CA5AP35218 305 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 TUBB3Q13509 450 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 GTF2H3Q13889 308 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 SLC14A2Q15849 920 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 ASTE1Q2TB18 679 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 TEX44Q53QW1 395 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 TCTN3Q6NUS6 607 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 CERS6Q6ZMG9 384 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 ASB18Q6ZVZ8 466 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 RBM12BQ8IXT5 1001 aaKnown RBP18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 TEX19Q8NA77 164 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 AKIRIN1Q9H9L7 192 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 LHX9Q9NQ69 397 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 SAE1Q9UBE0 346 aaPredicted RBP18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 EPHA6Q9UF33 1036 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 KCND3Q9UK17 655 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 PADI1Q9ULC6 663 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 PSMD13Q9UNM6 376 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 MAN2B2Q9Y2E5 1009 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 CCDC88CQ9P219 2028 aa18.06■□□□□ 0.48
SSSCA1-206ENST00000531405 UGT1A9O60656 530 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 RFPL1O75677 317 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 PDGFAP04085 211 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 VCLP18206 1134 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 UGT1A6P19224 532 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 UGT1A1P22309 533 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 UGT1A4P22310 534 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 HALP42357 657 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 CHRNA4P43681 627 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 CTSCP53634 463 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 PMS2P54278 862 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms