RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	P2RX3	P56373	397 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	NANOS2	P60321	138 aa	Known RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ZP1	P60852	638 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CSNK2A1	P68400	391 aa	Predicted RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ZXDB	P98169	803 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ROR2	Q01974	943 aa	Known RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	MAD2L1	Q13257	205 aa	Predicted RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	KRT33B	Q14525	404 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	NR1D2	Q14995	579 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	DECR1	Q16698	335 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	MMEL1	Q495T6	779 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PLA2G4F	Q68DD2	849 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	LCN10	Q6JVE6	187 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CAVIN1	Q6NZI2	390 aa	Known RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	SUSD1	Q6UWL2	747 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	SLC16A12	Q6ZSM3	486 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	MON1B	Q7L1V2	547 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CCDC91	Q7Z6B0	441 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CEP57	Q86XR8	500 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PALB2	Q86YC2	1186 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	UNC45B	Q8IWX7	931 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	NUP93	Q8N1F7	819 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	AFAP1	Q8N556	730 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	IQCF1	Q8N6M8	205 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TMCO5A	Q8N6Q1	288 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	IQUB	Q8NA54	791 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	SMRP1	Q8NCR6	262 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	RBM15B	Q8NDT2	890 aa	Known RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CSNK2A3	Q8NEV1	391 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TMEM174	Q8WUU8	243 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TRIB2	Q92519	343 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ERGIC1	Q969X5	290 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	FNBP1	Q96RU3	617 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	FERMT1	Q9BQL6	677 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PPIL3	Q9H2H8	161 aa	Known RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TRPV4	Q9HBA0	871 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CHMP1A	Q9HD42	196 aa	Predicted RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	MMP25	Q9NPA2	562 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	KRCC1	Q9NPI7	259 aa	Predicted RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TMEM51	Q9NW97	253 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	RCOR1	Q9UKL0	485 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PAM16	Q9Y3D7	125 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	SNX5	Q9Y5X3	404 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	LIPG	Q9Y5X9	500 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	BIVM-ERCC5	R4GMW8	1640 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CFTR	P13569	1480 aa		3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ASTN2	O75129	1339 aa	Predicted RBP	3.39	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	VPS8	Q8N3P4	1428 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CC2D2A	Q9P2K1	1620 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TRAV34	A0A0B4J273	112 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	HTR3E	A5X5Y0	456 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	GOLGA6L9	A6NEM1	432 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PRR23D1	E9PI22	279 aa	Predicted RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	NDUFS4	O43181	175 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CREG1	O75629	220 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	SOX30	O94993	753 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	BCL10	O95999	233 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CYC1	P08574	325 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	FGF2	P09038	288 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PRR23D2	P0DMB1	279 aa	Predicted RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CHRNB1	P11230	501 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	SRC	P12931	536 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ACHE	P22303	614 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	EEF1B2	P24534	225 aa	Known RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TLX1	P31314	330 aa	Predicted RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	HNRNPH1	P31943	449 aa	Known RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	COMP	P49747	757 aa	Predicted RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	BMX	P51813	675 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ZNF75D	P51815	510 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	LIMK1	P53667	647 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	SELENOV	P59797	346 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PPAT	Q06203	517 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	DSC1	Q08554	894 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	GAGE2B	Q13066	116 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PPIG	Q13427	754 aa	Known RBP eCLIP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TUBB2A	Q13885	445 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	MORF4L2	Q15014	288 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	E2F5	Q15329	346 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ASIC2	Q16515	512 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TYSND1	Q2T9J0	566 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TWISTNB	Q3B726	338 aa	Predicted RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	GAGE2E	Q4V326	116 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	FAM98B	Q52LJ0	330 aa	Known RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	WASHC2D	Q5SRD0	308 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	DCST1	Q5T197	706 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	FAM109B	Q6ICB4	259 aa	Predicted RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	TMEM211	Q6ICI0	200 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	GAGE2A	Q6NT46	116 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PAPD4	Q6PIY7	484 aa	Known RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	FAM198B	Q6UWH4	519 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	SHF	Q7M4L6	423 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CENPV	Q7Z7K6	275 aa	Predicted RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	CCDC190	Q86UF4	302 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	DSEL	Q8IZU8	1212 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	PAPD5	Q8NDF8	572 aa	Known RBP	3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ENGASE	Q8NFI3	743 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	ARRDC2	Q8TBH0	407 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	HM13	Q8TCT9	377 aa		3.38	□□□□□ -1.87
CALCOCO2-223	ENST00000514267	GPT2	Q8TD30	523 aa		3.38	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms