RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 HLTFQ14527 1009 aaKnown RBP eCLIP9.67□□□□□ -0.869e-6■□□□□ 9.4
CALD1-223ENST00000496024 DBN1Q16643 649 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 AMZ1Q400G9 498 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 GPR33Q49SQ1 333 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 FASTKD1Q53R41 847 aaKnown RBP9.67□□□□□ -0.86
CALD1-223ENST00000496024 IZUMO3Q5VZ72 239 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 AFTPHQ6ULP2 937 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 TMPRSS7Q7RTY8 843 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 C11orf96Q7Z7L8 435 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 AMZ2Q86W34 360 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 ZNF761Q86XN6 746 aaPredicted RBP9.67□□□□□ -0.86
CALD1-223ENST00000496024 JAMLQ86YT9 394 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 PPIL6Q8IXY8 311 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 GALNT15Q8N3T1 639 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 OTUD6BQ8N6M0 293 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 NAT8LQ8N9F0 302 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 OR4L1Q8NH43 312 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 SLC37A2Q8TED4 501 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.67□□□□□ -0.86
CALD1-223ENST00000496024 SERPINB12Q96P63 405 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 C19orf43Q9BQ61 176 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 TRIM56Q9BRZ2 755 aaKnown RBP9.67□□□□□ -0.86
CALD1-223ENST00000496024 TIMM29Q9BSF4 260 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 IL22Q9GZX6 179 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 SAMD15Q9P1V8 674 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 RIMKLBQ9ULI2 386 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 WASF3Q9UPY6 502 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 IGF2RP11717 2491 aa9.67□□□□□ -0.86
CALD1-223ENST00000496024 FRYQ5TBA9 3013 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 TRBV5-4A0A0C4DH59 114 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 SDR42E2A6NKP2 422 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 AGAP14A8MT82 685 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 GOLGA8KD6RF30 607 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 GOLGA8TH3BQL2 631 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 AGRPO00253 132 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 PPM1DO15297 605 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 SGTAO43765 313 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 BANF1O75531 89 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 RPLP0P05388 317 aaKnown RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 POLBP06746 335 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 CDK4P11802 303 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 GLB1P16278 677 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 IDSP22304 550 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 OR1D5P58170 312 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 TARDBPQ13148 414 aaKnown RBP eCLIP9.66□□□□□ -0.86
CALD1-223ENST00000496024 NFE2L1Q14494 772 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 RNASEH2BQ5TBB1 312 aaKnown RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 FAM83HQ6ZRV2 1179 aaPredicted RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 LDB1Q86U70 411 aaPredicted RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 TMPRSS12Q86WS5 348 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 CCNJLQ8IV13 435 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 TRIM48Q8IWZ4 208 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 CLDN19Q8N6F1 224 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 MCUQ8NE86 351 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 SPATA4Q8NEY3 305 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 OR6C4Q8NGE1 309 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 SLCO2A1Q92959 643 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 ZNF669Q96BR6 464 aaPredicted RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 MFSD3Q96ES6 412 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 ZNF514Q96K75 400 aaPredicted RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 RUNDC3BQ96NL0 473 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 XAB2Q9HCS7 855 aaKnown RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 CATSPERZQ9NTU4 200 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 SCHIP1Q9P0W5 487 aaPredicted RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 ANAPC5Q9UJX4 755 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 ATXN7L1Q9ULK2 861 aaPredicted RBP9.66□□□□□ -0.86
CALD1-223ENST00000496024 SOX13Q9UN79 622 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 PSMD13Q9UNM6 376 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 CLCA2Q9UQC9 943 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 NEUROG3Q9Y4Z2 214 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 MAD1L1Q9Y6D9 718 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 PRSS21Q9Y6M0 314 aa9.66□□□□□ -0.86
CALD1-223ENST00000496024 A0A1W2PQM1 296 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 A6NCN8 305 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 MGAT4DA6NG13 374 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 EFCAB8A8MWE9 144 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 CD3EAPO15446 510 aaKnown RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 NUDT21O43809 227 aaKnown RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 OR1I1O60431 355 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 CSO75390 466 aaKnown RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 VAPBO95292 243 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 MLNP12872 115 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 F3P13726 295 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 SLC2A4P14672 509 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 ITGB6P18564 788 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 PSMA3P25788 255 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 MAPK9P45984 424 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 CLCNKAP51800 687 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 SHC2P98077 582 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 HHEXQ03014 270 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 ACVR1Q04771 509 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 DHX34Q14147 1143 aaKnown RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 SPIDRQ14159 915 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 SEMA3AQ14563 771 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 BRD3Q15059 726 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 BBS9Q3SYG4 887 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 BCL7AQ4VC05 210 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 HP1BP3Q5SSJ5 553 aaPredicted RBP9.65□□□□□ -0.86
CALD1-223ENST00000496024 IYDQ6PHW0 289 aa9.65□□□□□ -0.86
CALD1-223ENST00000496024 CCNI2Q6ZMN8 369 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms