RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 DARS2Q6PI48 645 aaKnown RBP14.31□□□□□ -0.12
COL27A1-203ENST00000468565 MARK2Q7KZI7 788 aaKnown RBP14.31□□□□□ -0.12
COL27A1-203ENST00000468565 SFTPA2Q8IWL1 248 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 IPMKQ8NFU5 416 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 DTX3LQ8TDB6 740 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 ATG4AQ8WYN0 398 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 TLCD1Q96CP7 247 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 PGM2Q96G03 612 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 PLEKHG4BQ96PX9 1271 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 TMEM109Q9BVC6 243 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 FSD1LQ9BXM9 530 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 LRRN3Q9H3W5 708 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 C10orf88Q9H8K7 445 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 CNOT10Q9H9A5 744 aaKnown RBP14.31□□□□□ -0.12
COL27A1-203ENST00000468565 LRIT1Q9P2V4 623 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
COL27A1-203ENST00000468565 RNF215Q9Y6U7 377 aa14.31□□□□□ -0.12
COL27A1-203ENST00000468565 A0A1W2PQM1 296 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 GPR89AB7ZAQ6 455 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 D6RAR5 112 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 AURKAO14965 403 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 DXOO77932 396 aaKnown RBP14.3□□□□□ -0.12
COL27A1-203ENST00000468565 SLC4A1P02730 911 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 RPLP0P05388 317 aaKnown RBP14.3□□□□□ -0.12
COL27A1-203ENST00000468565 GPR89BP0CG08 455 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 ACTR1BP42025 376 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 PDX1P52945 283 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 ACTR1AP61163 376 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 MAGOHP61326 146 aaKnown RBP14.3□□□□□ -0.12
COL27A1-203ENST00000468565 GABREP78334 506 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 CCL7P80098 99 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 SLC29A2Q14542 456 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 NR1D2Q14995 579 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 SKIDA1Q1XH10 827 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 ANKRD20A2Q5SQ80 823 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 ANKRD20A1Q5TYW2 823 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 ANKRD20A3Q5VUR7 823 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 ZDHHC20Q5W0Z9 365 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 IGF2-ASQ6U949 168 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 ZNF438Q7Z4V0 828 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 SPRED1Q7Z699 444 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 CCNJLQ8IV13 435 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 NAGSQ8N159 534 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 TTC30BQ8N4P2 665 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 SNIP1Q8TAD8 396 aaKnown RBP14.3□□□□□ -0.12
COL27A1-203ENST00000468565 PPP1R2P1Q96PQ5 205 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 GFM1Q96RP9 751 aaKnown RBP14.3□□□□□ -0.12
COL27A1-203ENST00000468565 GORASP1Q9BQQ3 440 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 SYNDIG1Q9H7V2 258 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 POLR1BQ9H9Y6 1135 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 PLEKHM1Q9Y4G2 1056 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 CELSR3Q9NYQ7 3312 aa14.3□□□□□ -0.12
COL27A1-203ENST00000468565 F5H423 210 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 TMX2-CTNND1H3BSU7 103 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 CASC3O15234 703 aaKnown RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 KCNN4O15554 427 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 RIPK2O43353 540 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 NUAK1O60285 661 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 SHBGP04278 402 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 CHRNA4P43681 627 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 TBC1D25Q3MII6 688 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 CCDC25Q86WR0 208 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 ARL14Q8N4G2 192 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 SLC25A41Q8N5S1 370 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 CCDC89Q8N998 374 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 GLYATL1Q969I3 302 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 ATXN7L3BQ96GX2 97 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 SPATA13Q96N96 652 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 VPS35Q96QK1 796 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 TRIM39Q9HCM9 518 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 ZNHIT2Q9UHR6 403 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 ANAPC5Q9UJX4 755 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 R3HDM2Q9Y2K5 976 aaKnown RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 AAR2Q9Y312 384 aaKnown RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 CFAP47Q6ZTR5 3102 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 A0A087WV48 116 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 RGS16O15492 202 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 ZW10O43264 779 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 SLC25A14O95258 325 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 MAZP56270 477 aaKnown RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 PRPSAP1Q14558 356 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 CEP128Q6ZU80 1094 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 PHYKPLQ8IUZ5 450 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 FGF11Q92914 225 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 LIN37Q96GY3 246 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 ZNF578Q96N58 590 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 FAM118BQ9BPY3 351 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 ATXN10Q9UBB4 475 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 PCDHGA8Q9Y5G5 932 aa14.29□□□□□ -0.12
COL27A1-203ENST00000468565 PCYT1BQ9Y5K3 369 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-203ENST00000468565 LAMA5O15230 3695 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 GRID2O43424 1007 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 TLX3O43711 291 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-203ENST00000468565 AGTP01019 485 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 MPOP05164 745 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 PSMB4P28070 264 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 CCKBRP32239 447 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 ADRA1AP35348 466 aa14.28□□□□□ -0.12
COL27A1-203ENST00000468565 ITGA8P53708 1063 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms