RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 PRAMEF12O95522 483 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 F11P03951 625 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 CST5P28325 142 aaPredicted RBP12.46□□□□□ -0.41
TRO-215ENST00000445561 CORO1AP31146 461 aaKnown RBP12.46□□□□□ -0.41
TRO-215ENST00000445561 TTPAP49638 278 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 KPNA1P52294 538 aaPredicted RBP12.46□□□□□ -0.41
TRO-215ENST00000445561 FOXM1Q08050 763 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 TWF1Q12792 350 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 ILF2Q12905 390 aaKnown RBP12.46□□□□□ -0.41
TRO-215ENST00000445561 RNF219Q5W0B1 726 aaPredicted RBP12.46□□□□□ -0.41
TRO-215ENST00000445561 TXNDC11Q6PKC3 985 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 C9orf16Q9BUW7 83 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 C1QTNF3Q9BXJ4 246 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 NUSAP1Q9BXS6 441 aaKnown RBP12.46□□□□□ -0.41
TRO-215ENST00000445561 BRINP2Q9C0B6 783 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 NMRK2Q9NPI5 230 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 ATXN10Q9UBB4 475 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 SUN2Q9UH99 717 aa12.46□□□□□ -0.41
TRO-215ENST00000445561 LEF1Q9UJU2 399 aaPredicted RBP12.46□□□□□ -0.41
TRO-215ENST00000445561 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.46□□□□□ -0.42
TRO-215ENST00000445561 CNPP09543 421 aaKnown RBP12.46□□□□□ -0.42
TRO-215ENST00000445561 CDK4P11802 303 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 RFC2P35250 354 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 OR4D2P58180 307 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 ARF5P84085 180 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 ZNF177Q13360 481 aaPredicted RBP12.46□□□□□ -0.42
TRO-215ENST00000445561 SLC36A3Q495N2 470 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 PABPC1LQ4VXU2 614 aaKnown RBP12.46□□□□□ -0.42
TRO-215ENST00000445561 ATP6AP1LQ52LC2 224 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 ACBD5Q5T8D3 534 aaPredicted RBP12.46□□□□□ -0.42
TRO-215ENST00000445561 SFRP1Q8N474 314 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 PACRGLQ8N7B6 248 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 B4GALNT2Q8NHY0 566 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 HM13Q8TCT9 377 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 MAGEE2Q8TD90 523 aaPredicted RBP12.46□□□□□ -0.42
TRO-215ENST00000445561 BCL7CQ8WUZ0 217 aaPredicted RBP12.46□□□□□ -0.42
TRO-215ENST00000445561 PPM1MQ96MI6 270 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 CASD1Q96PB1 797 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 THEGQ9P2T0 379 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 ARIH1Q9Y4X5 557 aaPredicted RBP12.46□□□□□ -0.42
TRO-215ENST00000445561 CHD5Q8TDI0 1954 aa12.46□□□□□ -0.42
TRO-215ENST00000445561 CLDN11O75508 207 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 RASAL1O95294 804 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 GPIP06744 558 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 CAPN1P07384 714 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 ITGB6P18564 788 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 MYF6P23409 242 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 HRH2P25021 359 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 CDK9P50750 372 aaKnown RBP12.45□□□□□ -0.42
TRO-215ENST00000445561 MTPNP58546 118 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 SELPLGQ14242 412 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 IL27RAQ6UWB1 636 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 RNF180Q86T96 592 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 METTL6Q8TCB7 284 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 EZH1Q92800 747 aaPredicted RBP12.45□□□□□ -0.42
TRO-215ENST00000445561 DTNBP1Q96EV8 351 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 VPS50Q96JG6 964 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 ANAPC2Q9UJX6 822 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 PCDHB7Q9Y5E2 793 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 COMMD10Q9Y6G5 202 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 GBF1Q92538 1859 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 hCG_2014768A0A024R1R8 64 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 CA12O43570 354 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 TBC1D4O60343 1298 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 GUCA1CO95843 209 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 CD160O95971 181 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 G6PDP11413 515 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 CTPS1P17812 591 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 DGKQP52824 942 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 PDCD4Q53EL6 469 aaKnown RBP12.45□□□□□ -0.42
TRO-215ENST00000445561 TMTC4Q5T4D3 741 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 TBPL2Q6SJ96 375 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 PTRH1Q86Y79 214 aaKnown RBP12.45□□□□□ -0.42
TRO-215ENST00000445561 TSPEARQ8WU66 669 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 KCNJ9Q92806 393 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 BHMTQ93088 406 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 BIRC7Q96CA5 298 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 EID2BQ96D98 161 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 GLT1D1Q96MS3 346 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 ADGRE3Q9BY15 652 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 EBF1Q9UH73 591 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 PCDHB9Q9Y5E1 797 aa12.45□□□□□ -0.42
TRO-215ENST00000445561 ILVBLA1L0T0 632 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 ZNF840PA6NDX5 716 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 CLOCKO15516 846 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 RSL1D1O76021 490 aaKnown RBP12.44□□□□□ -0.42
TRO-215ENST00000445561 STC2O76061 302 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 SNAP29O95721 258 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 ALPIP09923 528 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 CLCN7P51798 805 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 TUBA4AP68366 448 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 CTBSQ01459 385 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 LRRC23Q53EV4 343 aaPredicted RBP12.44□□□□□ -0.42
TRO-215ENST00000445561 ATXN7L2Q5T6C5 722 aaPredicted RBP12.44□□□□□ -0.42
TRO-215ENST00000445561 CXorf57Q6NSI4 855 aaKnown RBP12.44□□□□□ -0.42
TRO-215ENST00000445561 FRA10AC1Q70Z53 315 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 SPRED1Q7Z699 444 aa12.44□□□□□ -0.42
TRO-215ENST00000445561 CLVS1Q8IUQ0 354 aaPredicted RBP12.44□□□□□ -0.42
TRO-215ENST00000445561 TTC30BQ8N4P2 665 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms