RNA–Protein interactions for RNA: ENST00000438169.6

KRR1-202, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 1 (best) BASIC

Gene KRR1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-202ENST00000438169 AJAP1Q9UKB5 411 aaPredicted RBP4□□□□□ -1.77
KRR1-202ENST00000438169 CPSF3Q9UKF6 684 aaKnown RBP4□□□□□ -1.77
KRR1-202ENST00000438169 CDH9Q9ULB4 789 aa4□□□□□ -1.77
KRR1-202ENST00000438169 SLC9A8Q9Y2E8 581 aa4□□□□□ -1.77
KRR1-202ENST00000438169 IFT52Q9Y366 437 aa4□□□□□ -1.77
KRR1-202ENST00000438169 LRP12Q9Y561 859 aa4□□□□□ -1.77
KRR1-202ENST00000438169 PCDHA3Q9Y5H8 950 aa4□□□□□ -1.77
KRR1-202ENST00000438169 USP16Q9Y5T5 823 aa4□□□□□ -1.77
KRR1-202ENST00000438169 ACTL7AQ9Y615 435 aa4□□□□□ -1.77
KRR1-202ENST00000438169 PIAS3Q9Y6X2 628 aa4□□□□□ -1.77
KRR1-202ENST00000438169 V9GYQ6 96 aa4□□□□□ -1.77
KRR1-202ENST00000438169 KIF27Q86VH2 1401 aa4□□□□□ -1.77
KRR1-202ENST00000438169 NLRP1Q9C000 1473 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CEP164Q9UPV0 1460 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 SPATA31A3Q5VYP0 1347 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PNPLA7Q6ZV29 1317 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PCDH11XQ9BZA7 1347 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PCDH11YQ9BZA8 1340 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 A0A0U1RQK1 487 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 ZNF320A2RRD8 509 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 ZSCAN5BA6NJL1 495 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 OR6C75A6NL08 312 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CXorf49A8MYA2 514 aaPredicted RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 H0YJX3 145 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 TAF4O00268 1085 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 LAD1O00515 517 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 MAP2K7O14733 419 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 MEIS2O14770 477 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 POLR1CO15160 346 aaPredicted RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 TP73O15350 636 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CLDN3O15551 220 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 HEXIM1O94992 359 aaKnown RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 SEMA3DO95025 777 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 SPDEFO95238 335 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 DEXIO95424 95 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 NSA2O95478 260 aaKnown RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 CHEK2O96017 543 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 GASTP01350 101 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CRYABP02511 175 aaKnown RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 APOA1P02647 267 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 APOC1P02654 83 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CSTBP04080 98 aaKnown RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 AMY1AP04745 511 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 THP07101 528 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 FHP07954 510 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 ITGA2BP08514 1039 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 SERPINF2P08697 491 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 KRT16P08779 473 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 KITP10721 976 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 SLC2A3P11169 496 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CKMT1AP12532 417 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 SELLP14151 372 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 GNSP15586 552 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 IFNAR1P17181 557 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CCNA2P20248 432 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 F8A1P23610 371 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PCSK1P29120 753 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 SLC7A1P30825 629 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CCR1P32246 355 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 HTR7P34969 479 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CRHR1P34998 444 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CTNNB1P35222 781 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 HOXD13P35453 343 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 MAGEA1P43355 309 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 ARCN1P48444 511 aaKnown RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 HSPA7P48741 367 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 DHPSP49366 369 aaPredicted RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 ALDH7A1P49419 539 aaKnown RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 MFAP3P55082 362 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 HUNKP57058 714 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 TAS2R40P59535 323 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 STX1BP61266 288 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 HNRNPKP61978 463 aaKnown RBP eCLIP3.99□□□□□ -1.77
KRR1-202ENST00000438169 GNAI1P63096 354 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 IFI35P80217 286 aaPredicted RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 GLO1Q04760 184 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 TARDBPQ13148 414 aaKnown RBP eCLIP3.99□□□□□ -1.77
KRR1-202ENST00000438169 RPA4Q13156 261 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CHIT1Q13231 466 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PMS2P3Q13401 168 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 XRCC4Q13426 336 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 NAB1Q13506 487 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PMS2P11Q13670 270 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 TUBB2AQ13885 445 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 KCNC3Q14003 757 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 RAB39AQ14964 217 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PON2Q15165 354 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PTPRRQ15256 657 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 ANGPT1Q15389 498 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 SF3B4Q15427 424 aaKnown RBP eCLIP3.99□□□□□ -1.775e-8■■■■■ 28.8
KRR1-202ENST00000438169 CYTH1Q15438 398 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 CAMK4Q16566 473 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 FAM83EQ2M2I3 478 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 KHDC1Q4VXA5 237 aaKnown RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 YIF1BQ5BJH7 314 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 FAM47AQ5JRC9 791 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 ATPAF1Q5TC12 328 aaPredicted RBP3.99□□□□□ -1.77
KRR1-202ENST00000438169 CACHD1Q5VU97 1274 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 C1orf146Q5VVC0 180 aa3.99□□□□□ -1.77
KRR1-202ENST00000438169 PLEKHA7Q6IQ23 1121 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms