RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 KLHL23Q8NBE8 558 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 GPR26Q8NDV2 337 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 NMD3Q96D46 503 aaKnown RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 PRPF18Q99633 342 aaKnown RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 BBS2Q9BXC9 721 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 LTB4R2Q9NPC1 389 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 MAGED1Q9Y5V3 778 aaPredicted RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 WNT6Q9Y6F9 365 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 TRIM43BA6NCK2 446 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 PAPSS2O95340 614 aaPredicted RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 BPIP17213 487 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 IL12AP29459 219 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 HTR7P34969 479 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 CDH15P55291 814 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 NFYCQ13952 458 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 ABRAXAS2Q15018 415 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 SLC22A9Q8IVM8 553 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 TADA1Q96BN2 335 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 TRIM43Q96BQ3 446 aaPredicted RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 AURKBQ96GD4 344 aaPredicted RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 CLPBQ9H078 707 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 ELOVL2Q9NXB9 296 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 KLQ9UEF7 1012 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 POLR3HQ9Y535 204 aaPredicted RBP11.79□□□□□ -0.52
PTPRN-204ENST00000423636 FRMPD3Q5JV73 1810 aa11.79□□□□□ -0.52
PTPRN-204ENST00000423636 SCAMP1O15126 338 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 FGF18O76093 207 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 LRG1P02750 347 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 GPX3P22352 226 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ITPKAP23677 461 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 MAPK10P53779 464 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 FRG1Q14331 258 aaKnown RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 RFTN2Q52LD8 501 aaPredicted RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 OR52E8Q6IFG1 317 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 TRIM74Q86UV6 250 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 SFTPA1Q8IWL2 248 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 TTC30BQ8N4P2 665 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 KRTCAP2Q8N6L1 136 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 OR4F6Q8NGB9 312 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 GBP5Q96PP8 586 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 RANBP9Q96S59 729 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 IL21Q9HBE4 155 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ITM2BQ9Y287 266 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 COL6A3P12111 3177 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ZFC3H1O60293 1989 aaKnown RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 TYW5A2RUC4 315 aaKnown RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ACOT8O14734 319 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ABLIM3O94929 683 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 G6PDP11413 515 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 DNAJB13P59910 316 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 SELPLGQ14242 412 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 LRRC66Q68CR7 880 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 DPY19L3Q6ZPD9 716 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 CHST15Q7LFX5 561 aaPredicted RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 GALNT10Q86SR1 603 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 GABPB2Q8TAK5 448 aaPredicted RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 GATA6Q92908 595 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 KIAA1191Q96A73 305 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 MAELQ96JY0 434 aaKnown RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 TTLL2Q9BWV7 592 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 GRIP2Q9C0E4 1043 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ELAC1Q9H777 363 aaKnown RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 IPPKQ9H8X2 491 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 IL17CQ9P0M4 197 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 RNF11Q9Y3C5 154 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ANGPTL3Q9Y5C1 460 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 HEMK1Q9Y5R4 338 aaPredicted RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 AP4B1Q9Y6B7 739 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 MUC3AQ02505 3323 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 KANSL1LA0AUZ9 987 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 C7orf72A4D263 438 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 A6NHS1 94 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 SLC2A4P14672 509 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 RPL38P63173 70 aaKnown RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 XIAPP98170 497 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 PLOD1Q02809 727 aaPredicted RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 LCP2Q13094 533 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 SQLEQ14534 574 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 GTDC1Q4AE62 458 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ATP13A5Q4VNC0 1218 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 IRGCQ6NXR0 463 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 VRK3Q8IV63 474 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 AFAP1L2Q8N4X5 818 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 MRPS31Q92665 395 aaKnown RBP11.78□□□□□ -0.52
PTPRN-204ENST00000423636 TOP1MTQ969P6 601 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 SLCO4A1Q96BD0 722 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 ZSWIM3Q96MP5 696 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 AP4S1Q9Y587 144 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 BRWD1Q9NSI6 2320 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 NUMA1Q14980 2115 aa11.78□□□□□ -0.52
PTPRN-204ENST00000423636 SLCO1B7G3V0H7 640 aa11.77□□□□□ -0.52
PTPRN-204ENST00000423636 PITPNM1O00562 1244 aa11.77□□□□□ -0.52
PTPRN-204ENST00000423636 KERAO60938 352 aa11.77□□□□□ -0.52
PTPRN-204ENST00000423636 GNAO1P09471 354 aa11.77□□□□□ -0.52
PTPRN-204ENST00000423636 AKT1P31749 480 aa11.77□□□□□ -0.52
PTPRN-204ENST00000423636 ZIK1Q3SY52 487 aaPredicted RBP11.77□□□□□ -0.52
PTPRN-204ENST00000423636 OTUD3Q5T2D3 398 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms