RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 TRNAU1APQ9NX07 287 aaKnown RBP20.34■□□□□ 0.85
C4orf48-202ENST00000409860 TXNDC16Q9P2K2 825 aa20.34■□□□□ 0.85
C4orf48-202ENST00000409860 SLC17A6Q9P2U8 582 aa20.34■□□□□ 0.85
C4orf48-202ENST00000409860 SPASTQ9UBP0 616 aa20.34■□□□□ 0.85
C4orf48-202ENST00000409860 KLF15Q9UIH9 416 aa20.34■□□□□ 0.85
C4orf48-202ENST00000409860 GNPTGQ9UJJ9 305 aa20.34■□□□□ 0.85
C4orf48-202ENST00000409860 PCDHB1Q9Y5F3 818 aa20.34■□□□□ 0.85
C4orf48-202ENST00000409860 CACNA1EQ15878 2313 aa20.34■□□□□ 0.85
C4orf48-202ENST00000409860 A0A1B0GTQ1 180 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 LNP1A1A4G5 178 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 CTIFO43310 598 aaKnown RBP20.33■□□□□ 0.85
C4orf48-202ENST00000409860 RIPK2O43353 540 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 FUCA1P04066 466 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 CD151P48509 253 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 PRLHRP49683 370 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 ADARP55265 1226 aaKnown RBP20.33■□□□□ 0.85
C4orf48-202ENST00000409860 LRP8Q14114 963 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 KBTBD12Q3ZCT8 623 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 PTRHD1Q6GMV3 140 aaKnown RBP20.33■□□□□ 0.85
C4orf48-202ENST00000409860 ASCL5Q7RTU5 278 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 FSTL5Q8N475 847 aaPredicted RBP20.33■□□□□ 0.85
C4orf48-202ENST00000409860 MINDY1Q8N5J2 469 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 CLDN19Q8N6F1 224 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 UBLCP1Q8WVY7 318 aaPredicted RBP20.33■□□□□ 0.85
C4orf48-202ENST00000409860 CAVIN3Q969G5 261 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 TSSK1BQ9BXA7 367 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 P2RY12Q9H244 342 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 CCDC68Q9H2F9 335 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 TCEAL2Q9H3H9 227 aaPredicted RBP20.33■□□□□ 0.85
C4orf48-202ENST00000409860 ACSS3Q9H6R3 686 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 PARD6AQ9NPB6 346 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 SMYD2Q9NRG4 433 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 CRYL1Q9Y2S2 319 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 PRKAB1Q9Y478 270 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 DNMT3AQ9Y6K1 912 aaPredicted RBP20.33■□□□□ 0.85
C4orf48-202ENST00000409860 PRSS21Q9Y6M0 314 aa20.33■□□□□ 0.85
C4orf48-202ENST00000409860 H3BMM5 538 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 SCAMP1O15126 338 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 ERLIN1O75477 346 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 ESR1P03372 595 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 F7P08709 466 aaPredicted RBP20.32■□□□□ 0.84
C4orf48-202ENST00000409860 ACP5P13686 325 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 VCLP18206 1134 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 EPHA8P29322 1005 aaPredicted RBP20.32■□□□□ 0.84
C4orf48-202ENST00000409860 FMO4P31512 558 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 ILF2Q12905 390 aaKnown RBP20.32■□□□□ 0.84
C4orf48-202ENST00000409860 ILF3Q12906 894 aaKnown RBP eCLIP20.32■□□□□ 0.84
C4orf48-202ENST00000409860 INSCQ1MX18 579 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 KLHL38Q2WGJ6 581 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 PLA2G4EQ3MJ16 856 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 PRRT3Q5FWE3 981 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 UBAP2Q5T6F2 1119 aaKnown RBP20.32■□□□□ 0.84
C4orf48-202ENST00000409860 PRR23CQ6ZRP0 262 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 CHST15Q7LFX5 561 aaPredicted RBP20.32■□□□□ 0.84
C4orf48-202ENST00000409860 STRA8Q7Z7C7 330 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 ZNF547Q8IVP9 402 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 DCLK2Q8N568 766 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 PPM1NQ8N819 430 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 NAT14Q8WUY8 206 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 TIMM29Q9BSF4 260 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 EDEM2Q9BV94 578 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 LRRC61Q9BV99 259 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 GSDMCQ9BYG8 508 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 TMEM168Q9H0V1 697 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 RABGEF1Q9UJ41 708 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 PCYT1BQ9Y5K3 369 aaPredicted RBP20.32■□□□□ 0.84
C4orf48-202ENST00000409860 OTOGLQ3ZCN5 2332 aa20.32■□□□□ 0.84
C4orf48-202ENST00000409860 KLHL33A6NCF5 533 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 CXorf49A8MYA2 514 aaPredicted RBP20.31■□□□□ 0.84
C4orf48-202ENST00000409860 SGTAO43765 313 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 POP7O75817 140 aaKnown RBP20.31■□□□□ 0.84
C4orf48-202ENST00000409860 PIAS2O75928 621 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 HAUS5O94927 633 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 C1QAP02745 245 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 FTH1P02794 183 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 GSTM1P09488 218 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 PI4KAP42356 2102 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 GSTM4Q03013 218 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 BRD3Q15059 726 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 ELOCQ15369 112 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 AASDHQ4L235 1098 aaPredicted RBP20.31■□□□□ 0.84
C4orf48-202ENST00000409860 ZNF789Q5FWF6 425 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 BEND7Q8N7W2 519 aaPredicted RBP20.31■□□□□ 0.84
C4orf48-202ENST00000409860 ZNF548Q8NEK5 533 aaPredicted RBP20.31■□□□□ 0.84
C4orf48-202ENST00000409860 LMX1AQ8TE12 382 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 LINC00615Q96LM1 132 aaPredicted RBP20.31■□□□□ 0.84
C4orf48-202ENST00000409860 PANX3Q96QZ0 392 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 CPNE1Q99829 537 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 IL21RQ9HBE5 538 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 CORO1CQ9ULV4 474 aaPredicted RBP20.31■□□□□ 0.84
C4orf48-202ENST00000409860 COMMD10Q9Y6G5 202 aa20.31■□□□□ 0.84
C4orf48-202ENST00000409860 PCDH15Q96QU1 1955 aa20.3■□□□□ 0.84
C4orf48-202ENST00000409860 KNL1Q8NG31 2342 aa20.3■□□□□ 0.84
C4orf48-202ENST00000409860 PLXNB3Q9ULL4 1909 aa20.3■□□□□ 0.84
C4orf48-202ENST00000409860 AQP9O43315 295 aa20.3■□□□□ 0.84
C4orf48-202ENST00000409860 KCNJ13O60928 360 aa20.3■□□□□ 0.84
C4orf48-202ENST00000409860 SDC3O75056 442 aa20.3■□□□□ 0.84
C4orf48-202ENST00000409860 PIAS1O75925 651 aa20.3■□□□□ 0.84
C4orf48-202ENST00000409860 AHSGP02765 367 aa20.3■□□□□ 0.84
C4orf48-202ENST00000409860 PKMP14618 531 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms