RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 CUL9Q8IWT3 2517 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 OTOGLQ3ZCN5 2332 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 TCEA3O75764 348 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 ANXA6P08133 673 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 ENO3P13929 434 aaPredicted RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 ZNF8P17098 575 aaPredicted RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 MAOBP27338 520 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 NMBRP28336 390 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 CSRP3P50461 194 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 ARSDP51689 593 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 NR0B2Q15466 257 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 CAPRIN2Q6IMN6 1127 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 UGT3A1Q6NUS8 523 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 NEPROQ6NW34 567 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 UNC5AQ6ZN44 842 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 ZNF547Q8IVP9 402 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 PELI3Q8N2H9 469 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 MREGQ8N565 214 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 RASGEF1AQ8N9B8 481 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 NOA1Q8NC60 698 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 CDKL2Q92772 493 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 TMEM159Q96B96 161 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 APOL2Q9BQE5 337 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 FZD3Q9NPG1 666 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 ZC3H7BQ9UGR2 993 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 RAB21Q9UL25 225 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 NOVA2Q9UNW9 492 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 RPS6KL1Q9Y6S9 549 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SLC5A10A0PJK1 596 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 MATN2O00339 956 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SLC16A5O15375 505 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 TOX3O15405 576 aaPredicted RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 GPC4O75487 556 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SLCO2B1O94956 709 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 S1PR4O95977 384 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 F3P13726 295 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 CKMT2P17540 419 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 NUMBP49757 651 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SESN2P58004 480 aaPredicted RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 UBE2IP63279 158 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 DNAJC3Q13217 504 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SP140Q13342 867 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SEPT6Q14141 434 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 TMED2Q15363 201 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 TRIP13Q15645 432 aaPredicted RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 C14orf28Q4W4Y0 310 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 CDKL4Q5MAI5 379 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 XKR5Q6UX68 686 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 PRUNE1Q86TP1 453 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 KCNMB4Q86W47 210 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SLC22A15Q8IZD6 547 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SLC25A45Q8N413 288 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 MYRIPQ8NFW9 859 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 HMGCLL1Q8TB92 370 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 FBXO25Q8TCJ0 367 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 PDXPQ96GD0 296 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 PHOX2BQ99453 314 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 FMO2Q99518 471 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 CPNE1Q99829 537 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 WDR83Q9BRX9 315 aaKnown RBP7.41□□□□□ -1.22
USP16-204ENST00000399976 CLPBQ9H078 707 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 MVB12BQ9H7P6 319 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 SNX24Q9Y343 169 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 OR1A2Q9Y585 309 aa7.41□□□□□ -1.22
USP16-204ENST00000399976 LY6G6EA0A0G2JKS1 128 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 EME2A4GXA9 379 aaPredicted RBP7.4□□□□□ -1.22
USP16-204ENST00000399976 PATE3B3GLJ2 98 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 NOBOXO60393 691 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 CDK14O94921 469 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 CTSEP14091 401 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 GLB1P16278 677 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 CCNFP41002 786 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 ELK3P41970 407 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 GPLD1P80108 840 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 OLIG2Q13516 323 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 TRA2AQ13595 282 aaKnown RBP eCLIP7.4□□□□□ -1.22
USP16-204ENST00000399976 THOC5Q13769 683 aaKnown RBP7.4□□□□□ -1.22
USP16-204ENST00000399976 SF3A2Q15428 464 aaKnown RBP7.4□□□□□ -1.22
USP16-204ENST00000399976 MSS51Q4VC12 460 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 CDCP2Q5VXM1 449 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 RFLNAQ6ZTI6 216 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 AMZ2Q86W34 360 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 KLHDC8AQ8IYD2 350 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 SFRP1Q8N474 314 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 CAVIN3Q969G5 261 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 ZNF669Q96BR6 464 aaPredicted RBP7.4□□□□□ -1.22
USP16-204ENST00000399976 FCRL3Q96P31 734 aaPredicted RBP7.4□□□□□ -1.22
USP16-204ENST00000399976 RAB11FIP5Q9BXF6 653 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 FAM117AQ9C073 453 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 POLG2Q9UHN1 485 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 KLF15Q9UIH9 416 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 PRDM4Q9UKN5 801 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 CDV3Q9UKY7 258 aaKnown RBP7.4□□□□□ -1.22
USP16-204ENST00000399976 PNMA8BQ9ULN7 279 aaPredicted RBP7.4□□□□□ -1.22
USP16-204ENST00000399976 U3KQA8 63 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 MUC6Q6W4X9 2439 aa7.4□□□□□ -1.22
USP16-204ENST00000399976 TRIOO75962 3097 aa7.4□□□□□ -1.23
USP16-204ENST00000399976 WISP3O95389 354 aaPredicted RBP7.4□□□□□ -1.23
USP16-204ENST00000399976 RPN2P04844 631 aa7.4□□□□□ -1.23
USP16-204ENST00000399976 PIRTP0C851 137 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms