RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HTR3EA5X5Y0 456 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 ATP6AP2O75787 350 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 MLYCDO95822 493 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TUSC3Q13454 348 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 MOGQ16653 247 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 SLC9B1Q4ZJI4 515 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 CCNYL2Q5T2Q4 361 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TUBA3EQ6PEY2 450 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 MRPL10Q7Z7H8 261 aaKnown RBP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 P2RY8Q86VZ1 359 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 UBE2J2Q8N2K1 259 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 NAT16Q8N8M0 369 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 SPPL2BQ8TCT7 592 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 ISOC1Q96CN7 298 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TPD52L3Q96J77 140 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 TBL1YQ9BQ87 522 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 HGH1Q9BTY7 390 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.4□□□□□ -1.54
PTPRD-205ENST00000397611 POLE4Q9NR33 117 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 ATP6V1HQ9UI12 483 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 PCDHGA7Q9Y5G6 932 aa5.4□□□□□ -1.54
PTPRD-205ENST00000397611 CARNS1A5YM72 827 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 AURKAO14965 403 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 RPS17P08708 135 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 HTR1EP28566 365 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 AKT1P31749 480 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 TALDO1P37837 337 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 NKX2-5P52952 324 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 MYBPC1Q00872 1141 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 ABRQ12979 859 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 FSCN1Q16658 493 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 SLC15A3Q8IY34 581 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 PDLIM5Q96HC4 596 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 MYRFLQ96LU7 910 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 FCRL3Q96P31 734 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 NXF3Q9H4D5 531 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 TXNRD2Q9NNW7 524 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 ASIC5Q9NY37 505 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 GMIPQ9P107 970 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 TBC1D14Q9P2M4 693 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 SFMBT1Q9UHJ3 866 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 ABT1Q9ULW3 272 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 RABL2BQ9UNT1 228 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 MYO18AQ92614 2054 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 KLK8O60259 260 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 OXSR1O95747 527 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 S100A9P06702 114 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 DDX5P17844 614 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 GRIA2P42262 883 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 PIK3CGP48736 1102 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 HERVK_113P63132 956 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 BNC1Q01954 994 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 SERINC3Q13530 473 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 NCF4Q15080 339 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 MARC1Q5VT66 337 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 BTBD8Q5XKL5 378 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 PJA1Q8NG27 643 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 HDAC2Q92769 488 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 C8orf48Q96LL4 319 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 PKP2Q99959 881 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 KCNS3Q9BQ31 491 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 ERVK-6Q9BXR3 956 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 BRINP2Q9C0B6 783 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 GPBP1L1Q9HC44 474 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 ZNF358Q9NW07 568 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 RBM22Q9NW64 420 aaKnown RBP eCLIP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 EBF1Q9UH73 591 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 PRR23AA6NEV1 266 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 MYL12BO14950 172 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 TMCC2O75069 709 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 COQ9O75208 318 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 IDH2P48735 452 aaKnown RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 FAM182AQ5T1J6 154 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 GALNT5Q7Z7M9 940 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 PEX5LQ8IYB4 626 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 LRRC17Q8N6Y2 441 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 PIK3C3Q8NEB9 887 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 ACOX2Q99424 681 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 SPON2Q9BUD6 331 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 HERC2P3Q9BVR0 1158 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 CRTAC1Q9NQ79 661 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 H2AFY2Q9P0M6 372 aaPredicted RBP5.4□□□□□ -1.55
PTPRD-205ENST00000397611 POLG2Q9UHN1 485 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 OGDHLQ9ULD0 1010 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 MAPRE3Q9UPY8 281 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 ITM2BQ9Y287 266 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 RNF11Q9Y3C5 154 aa5.4□□□□□ -1.55
PTPRD-205ENST00000397611 IGLV3-10A0A075B6K4 115 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 M0QZQ0 153 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NDUFS2O75306 463 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TSPAN19P0C672 248 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 NCK1P16333 377 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CKMT2P17540 419 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CAPGP40121 348 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CD97P48960 835 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 CXCR4P61073 352 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 IL10RBQ08334 325 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 SIM2Q14190 667 aaPredicted RBP5.39□□□□□ -1.55
PTPRD-205ENST00000397611 BLOC1S3Q6QNY0 202 aa5.39□□□□□ -1.55
PTPRD-205ENST00000397611 TFAP2DQ7Z6R9 452 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms